RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 LOC100996750A0A140TA64 210 aa2.98□□□□□ -1.93
SH3GLB1-205ENST00000616170 PRM1P04553 51 aa2.95□□□□□ -1.94
SH3GLB1-205ENST00000616170 LCE2AQ5TA79 106 aaPredicted RBP2.94□□□□□ -1.94
SH3GLB1-205ENST00000616170 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
SH3GLB1-205ENST00000616170 MT1EP04732 61 aa2.93□□□□□ -1.94
SH3GLB1-205ENST00000616170 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
SH3GLB1-205ENST00000616170 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
SH3GLB1-205ENST00000616170 LCE2DQ5TA82 110 aaPredicted RBP2.87□□□□□ -1.95
SH3GLB1-205ENST00000616170 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
SH3GLB1-205ENST00000616170 MT1MQ8N339 61 aa2.84□□□□□ -1.95
SH3GLB1-205ENST00000616170 KRTAP4-9Q9BYQ8 210 aa2.82□□□□□ -1.96
SH3GLB1-205ENST00000616170 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
SH3GLB1-205ENST00000616170 MT3P25713 68 aa2.79□□□□□ -1.96
SH3GLB1-205ENST00000616170 MT4P47944 62 aa2.79□□□□□ -1.96
SH3GLB1-205ENST00000616170 LCE1DQ5T752 114 aa2.75□□□□□ -1.97
SH3GLB1-205ENST00000616170 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
SH3GLB1-205ENST00000616170 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
SH3GLB1-205ENST00000616170 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
SH3GLB1-205ENST00000616170 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
SH3GLB1-205ENST00000616170 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
SH3GLB1-205ENST00000616170 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.98
SH3GLB1-205ENST00000616170 KRTAP19-6Q3LI70 58 aa2.65□□□□□ -1.99
SH3GLB1-205ENST00000616170 LCE5AQ5TCM9 118 aa2.61□□□□□ -1.99
SH3GLB1-205ENST00000616170 MT1AP04731 61 aa2.61□□□□□ -1.99
SH3GLB1-205ENST00000616170 KMT2DO14686 5537 aa2.61□□□□□ -1.99
SH3GLB1-205ENST00000616170 SYNE2Q8WXH0 6885 aaKnown RBP2.6□□□□□ -1.99
SH3GLB1-205ENST00000616170 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
SH3GLB1-205ENST00000616170 FSIP2Q5CZC0 6907 aa2.57□□□□□ -2
SH3GLB1-205ENST00000616170 KRTAP9-7A8MTY7 169 aa2.56□□□□□ -2
SH3GLB1-205ENST00000616170 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
SH3GLB1-205ENST00000616170 MDN1Q9NU22 5596 aa2.54□□□□□ -2
SH3GLB1-205ENST00000616170 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
SH3GLB1-205ENST00000616170 KRTAP9-2Q9BYQ4 174 aa2.5□□□□□ -2.01
SH3GLB1-205ENST00000616170 MUC12Q9UKN1 5478 aa2.48□□□□□ -2.01
SH3GLB1-205ENST00000616170 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
SH3GLB1-205ENST00000616170 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
SH3GLB1-205ENST00000616170 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
SH3GLB1-205ENST00000616170 LCE1AQ5T7P2 110 aa2.45□□□□□ -2.02
SH3GLB1-205ENST00000616170 KRTAP9-4Q9BYQ2 154 aa2.44□□□□□ -2.02
SH3GLB1-205ENST00000616170 KRTAP20-1Q3LI63 56 aa2.36□□□□□ -2.03
SH3GLB1-205ENST00000616170 KRTAP9-6A0A140TA67 174 aa2.36□□□□□ -2.03
SH3GLB1-205ENST00000616170 DSTQ03001 7570 aaKnown RBP2.35□□□□□ -2.03
SH3GLB1-205ENST00000616170 KRTAP5-9P26371 169 aa2.34□□□□□ -2.04
SH3GLB1-205ENST00000616170 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
SH3GLB1-205ENST00000616170 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
SH3GLB1-205ENST00000616170 KRTAP6-3Q3LI67 103 aa2.31□□□□□ -2.04
SH3GLB1-205ENST00000616170 KRTAP2-2Q9BYT5 123 aa2.28□□□□□ -2.04
SH3GLB1-205ENST00000616170 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.06
SH3GLB1-205ENST00000616170 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.16□□□□□ -2.06
SH3GLB1-205ENST00000616170 KRTAP5-5Q701N2 237 aaPredicted RBP2.13□□□□□ -2.07
SH3GLB1-205ENST00000616170 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
SH3GLB1-205ENST00000616170 KRTAP4-6Q9BYQ5 205 aa2.09□□□□□ -2.08
SH3GLB1-205ENST00000616170 KRTAP9-9Q9BYP9 154 aa2.08□□□□□ -2.08
SH3GLB1-205ENST00000616170 NEBP20929 6669 aa2.07□□□□□ -2.08
SH3GLB1-205ENST00000616170 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
SH3GLB1-205ENST00000616170 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.08
SH3GLB1-205ENST00000616170 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
SH3GLB1-205ENST00000616170 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
SH3GLB1-205ENST00000616170 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
SH3GLB1-205ENST00000616170 KRTAP4-12Q9BQ66 201 aa1.88□□□□□ -2.11
SH3GLB1-205ENST00000616170 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
SH3GLB1-205ENST00000616170 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
SH3GLB1-205ENST00000616170 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
SH3GLB1-205ENST00000616170 KRTAP5-3Q6L8H2 238 aa1.76□□□□□ -2.13
SH3GLB1-205ENST00000616170 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
SH3GLB1-205ENST00000616170 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
SH3GLB1-205ENST00000616170 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
SH3GLB1-205ENST00000616170 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
SH3GLB1-205ENST00000616170 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
SH3GLB1-205ENST00000616170 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
SH3GLB1-205ENST00000616170 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
SH3GLB1-205ENST00000616170 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
SH3GLB1-205ENST00000616170 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.19
SH3GLB1-205ENST00000616170 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
SH3GLB1-205ENST00000616170 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
SH3GLB1-205ENST00000616170 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
SH3GLB1-205ENST00000616170 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms