RNA–Protein interactions for RNA: ENST00000616136.1

EP400-209, Transcript of E1A binding protein p400, humanhuman

TSL 2

Gene EP400, Length 3,134 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EP400-209ENST00000616136 MT1LQ93083 61 aa4.34□□□□□ -1.71
EP400-209ENST00000616136 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
EP400-209ENST00000616136 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
EP400-209ENST00000616136 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
EP400-209ENST00000616136 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
EP400-209ENST00000616136 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
EP400-209ENST00000616136 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
EP400-209ENST00000616136 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
EP400-209ENST00000616136 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
EP400-209ENST00000616136 MT1GP13640 62 aa4.19□□□□□ -1.74
EP400-209ENST00000616136 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
EP400-209ENST00000616136 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
EP400-209ENST00000616136 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
EP400-209ENST00000616136 MT1MQ8N339 61 aa4.07□□□□□ -1.76
EP400-209ENST00000616136 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
EP400-209ENST00000616136 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
EP400-209ENST00000616136 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
EP400-209ENST00000616136 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
EP400-209ENST00000616136 LCE3BQ5TA77 95 aa3.96□□□□□ -1.78
EP400-209ENST00000616136 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
EP400-209ENST00000616136 MDN1Q9NU22 5596 aa3.93□□□□□ -1.78
EP400-209ENST00000616136 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
EP400-209ENST00000616136 KRTAP9-6A0A140TA67 174 aa3.81□□□□□ -1.8
EP400-209ENST00000616136 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
EP400-209ENST00000616136 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
EP400-209ENST00000616136 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
EP400-209ENST00000616136 PRM1P04553 51 aa3.66□□□□□ -1.82
EP400-209ENST00000616136 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
EP400-209ENST00000616136 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
EP400-209ENST00000616136 MT1AP04731 61 aa3.62□□□□□ -1.83
EP400-209ENST00000616136 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.6□□□□□ -1.83
EP400-209ENST00000616136 SPRR2EP22531 72 aa3.59□□□□□ -1.83
EP400-209ENST00000616136 SPRR2BP35325 72 aa3.59□□□□□ -1.83
EP400-209ENST00000616136 SPRR2AP35326 72 aa3.59□□□□□ -1.83
EP400-209ENST00000616136 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
EP400-209ENST00000616136 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
EP400-209ENST00000616136 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
EP400-209ENST00000616136 SPRR2DP22532 72 aa3.43□□□□□ -1.86
EP400-209ENST00000616136 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
EP400-209ENST00000616136 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.86
EP400-209ENST00000616136 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
EP400-209ENST00000616136 MT3P25713 68 aa3.24□□□□□ -1.89
EP400-209ENST00000616136 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
EP400-209ENST00000616136 NEBP20929 6669 aa3.19□□□□□ -1.9
EP400-209ENST00000616136 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
EP400-209ENST00000616136 MT4P47944 62 aa3.14□□□□□ -1.91
EP400-209ENST00000616136 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
EP400-209ENST00000616136 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
EP400-209ENST00000616136 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
EP400-209ENST00000616136 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
EP400-209ENST00000616136 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
EP400-209ENST00000616136 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
EP400-209ENST00000616136 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
EP400-209ENST00000616136 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
EP400-209ENST00000616136 LCE1DQ5T752 114 aa2.93□□□□□ -1.94
EP400-209ENST00000616136 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
EP400-209ENST00000616136 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
EP400-209ENST00000616136 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
EP400-209ENST00000616136 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
EP400-209ENST00000616136 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
EP400-209ENST00000616136 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
EP400-209ENST00000616136 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
EP400-209ENST00000616136 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
EP400-209ENST00000616136 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
EP400-209ENST00000616136 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
EP400-209ENST00000616136 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
EP400-209ENST00000616136 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
EP400-209ENST00000616136 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.01
EP400-209ENST00000616136 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
EP400-209ENST00000616136 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
EP400-209ENST00000616136 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
EP400-209ENST00000616136 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
EP400-209ENST00000616136 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
EP400-209ENST00000616136 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
EP400-209ENST00000616136 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
EP400-209ENST00000616136 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.06
EP400-209ENST00000616136 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
EP400-209ENST00000616136 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms