RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 KMT2DO14686 5537 aa4.69□□□□□ -1.66
SSBP2-220ENST00000615665 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
SSBP2-220ENST00000615665 FCGBPQ9Y6R7 5405 aaPredicted RBP4.66□□□□□ -1.66
SSBP2-220ENST00000615665 KRTAP19-3Q7Z4W3 81 aa4.64□□□□□ -1.67
SSBP2-220ENST00000615665 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
SSBP2-220ENST00000615665 MT1MQ8N339 61 aa4.54□□□□□ -1.68
SSBP2-220ENST00000615665 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
SSBP2-220ENST00000615665 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
SSBP2-220ENST00000615665 SPRR2EP22531 72 aa4.48□□□□□ -1.69
SSBP2-220ENST00000615665 SPRR2BP35325 72 aa4.48□□□□□ -1.69
SSBP2-220ENST00000615665 SPRR2AP35326 72 aa4.48□□□□□ -1.69
SSBP2-220ENST00000615665 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
SSBP2-220ENST00000615665 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
SSBP2-220ENST00000615665 KRTAP2-3P0C7H8 128 aa4.43□□□□□ -1.7
SSBP2-220ENST00000615665 KRTAP2-4Q9BYR9 128 aa4.43□□□□□ -1.7
SSBP2-220ENST00000615665 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
SSBP2-220ENST00000615665 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
SSBP2-220ENST00000615665 SPRR2DP22532 72 aa4.31□□□□□ -1.72
SSBP2-220ENST00000615665 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
SSBP2-220ENST00000615665 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
SSBP2-220ENST00000615665 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
SSBP2-220ENST00000615665 SSPOA2VEC9 5147 aa4.25□□□□□ -1.73
SSBP2-220ENST00000615665 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
SSBP2-220ENST00000615665 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
SSBP2-220ENST00000615665 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
SSBP2-220ENST00000615665 MT1AP04731 61 aa4.13□□□□□ -1.75
SSBP2-220ENST00000615665 PRM1P04553 51 aa4.11□□□□□ -1.75
SSBP2-220ENST00000615665 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
SSBP2-220ENST00000615665 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
SSBP2-220ENST00000615665 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
SSBP2-220ENST00000615665 MT3P25713 68 aa3.97□□□□□ -1.77
SSBP2-220ENST00000615665 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
SSBP2-220ENST00000615665 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
SSBP2-220ENST00000615665 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
SSBP2-220ENST00000615665 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
SSBP2-220ENST00000615665 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.8
SSBP2-220ENST00000615665 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
SSBP2-220ENST00000615665 MT4P47944 62 aa3.81□□□□□ -1.8
SSBP2-220ENST00000615665 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.81
SSBP2-220ENST00000615665 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
SSBP2-220ENST00000615665 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
SSBP2-220ENST00000615665 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
SSBP2-220ENST00000615665 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
SSBP2-220ENST00000615665 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
SSBP2-220ENST00000615665 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
SSBP2-220ENST00000615665 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
SSBP2-220ENST00000615665 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
SSBP2-220ENST00000615665 NEBP20929 6669 aa3.38□□□□□ -1.87
SSBP2-220ENST00000615665 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
SSBP2-220ENST00000615665 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
SSBP2-220ENST00000615665 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
SSBP2-220ENST00000615665 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
SSBP2-220ENST00000615665 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
SSBP2-220ENST00000615665 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
SSBP2-220ENST00000615665 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
SSBP2-220ENST00000615665 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
SSBP2-220ENST00000615665 LCE1CQ5T751 118 aa2.9□□□□□ -1.94
SSBP2-220ENST00000615665 LCE1FQ5T754 118 aa2.9□□□□□ -1.94
SSBP2-220ENST00000615665 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
SSBP2-220ENST00000615665 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
SSBP2-220ENST00000615665 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
SSBP2-220ENST00000615665 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
SSBP2-220ENST00000615665 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
SSBP2-220ENST00000615665 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
SSBP2-220ENST00000615665 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.98
SSBP2-220ENST00000615665 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
SSBP2-220ENST00000615665 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
SSBP2-220ENST00000615665 KRTAP5-8O75690 187 aa2.46□□□□□ -2.01
SSBP2-220ENST00000615665 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
SSBP2-220ENST00000615665 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
SSBP2-220ENST00000615665 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
SSBP2-220ENST00000615665 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
SSBP2-220ENST00000615665 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
SSBP2-220ENST00000615665 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
SSBP2-220ENST00000615665 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
SSBP2-220ENST00000615665 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
SSBP2-220ENST00000615665 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 50.1 ms