RNA–Protein interactions for RNA: ENST00000615329.4

RPS6KC1-209, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-209ENST00000615329 SSPOA2VEC9 5147 aa4.4□□□□□ -1.71
RPS6KC1-209ENST00000615329 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
RPS6KC1-209ENST00000615329 MT1LQ93083 61 aa4.22□□□□□ -1.73
RPS6KC1-209ENST00000615329 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
RPS6KC1-209ENST00000615329 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
RPS6KC1-209ENST00000615329 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
RPS6KC1-209ENST00000615329 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
RPS6KC1-209ENST00000615329 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
RPS6KC1-209ENST00000615329 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
RPS6KC1-209ENST00000615329 MT1EP04732 61 aa4.18□□□□□ -1.74
RPS6KC1-209ENST00000615329 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
RPS6KC1-209ENST00000615329 SYNE2Q8WXH0 6885 aaKnown RBP4.11□□□□□ -1.75
RPS6KC1-209ENST00000615329 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
RPS6KC1-209ENST00000615329 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
RPS6KC1-209ENST00000615329 MACF1Q9UPN3 7388 aaKnown RBP4.02□□□□□ -1.77
RPS6KC1-209ENST00000615329 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
RPS6KC1-209ENST00000615329 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
RPS6KC1-209ENST00000615329 LCE2DQ5TA82 110 aaPredicted RBP3.97□□□□□ -1.77
RPS6KC1-209ENST00000615329 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
RPS6KC1-209ENST00000615329 PRM1P04553 51 aa3.94□□□□□ -1.78
RPS6KC1-209ENST00000615329 SPRR2EP22531 72 aa3.92□□□□□ -1.78
RPS6KC1-209ENST00000615329 SPRR2BP35325 72 aa3.92□□□□□ -1.78
RPS6KC1-209ENST00000615329 SPRR2AP35326 72 aa3.92□□□□□ -1.78
RPS6KC1-209ENST00000615329 MT1MQ8N339 61 aa3.92□□□□□ -1.78
RPS6KC1-209ENST00000615329 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
RPS6KC1-209ENST00000615329 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
RPS6KC1-209ENST00000615329 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
RPS6KC1-209ENST00000615329 SPRR2DP22532 72 aa3.74□□□□□ -1.81
RPS6KC1-209ENST00000615329 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
RPS6KC1-209ENST00000615329 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
RPS6KC1-209ENST00000615329 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
RPS6KC1-209ENST00000615329 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
RPS6KC1-209ENST00000615329 MT3P25713 68 aa3.56□□□□□ -1.84
RPS6KC1-209ENST00000615329 MT4P47944 62 aa3.54□□□□□ -1.84
RPS6KC1-209ENST00000615329 MT1AP04731 61 aa3.51□□□□□ -1.85
RPS6KC1-209ENST00000615329 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
RPS6KC1-209ENST00000615329 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
RPS6KC1-209ENST00000615329 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
RPS6KC1-209ENST00000615329 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
RPS6KC1-209ENST00000615329 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
RPS6KC1-209ENST00000615329 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
RPS6KC1-209ENST00000615329 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.89
RPS6KC1-209ENST00000615329 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
RPS6KC1-209ENST00000615329 KRTAP9-6A0A140TA67 174 aa3.24□□□□□ -1.89
RPS6KC1-209ENST00000615329 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
RPS6KC1-209ENST00000615329 NEBP20929 6669 aa3.13□□□□□ -1.91
RPS6KC1-209ENST00000615329 KRTAP4-6Q9BYQ5 205 aa3.06□□□□□ -1.92
RPS6KC1-209ENST00000615329 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
RPS6KC1-209ENST00000615329 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
RPS6KC1-209ENST00000615329 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
RPS6KC1-209ENST00000615329 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
RPS6KC1-209ENST00000615329 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
RPS6KC1-209ENST00000615329 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
RPS6KC1-209ENST00000615329 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
RPS6KC1-209ENST00000615329 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
RPS6KC1-209ENST00000615329 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
RPS6KC1-209ENST00000615329 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
RPS6KC1-209ENST00000615329 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
RPS6KC1-209ENST00000615329 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
RPS6KC1-209ENST00000615329 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
RPS6KC1-209ENST00000615329 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
RPS6KC1-209ENST00000615329 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
RPS6KC1-209ENST00000615329 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
RPS6KC1-209ENST00000615329 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
RPS6KC1-209ENST00000615329 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.02
RPS6KC1-209ENST00000615329 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
RPS6KC1-209ENST00000615329 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
RPS6KC1-209ENST00000615329 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
RPS6KC1-209ENST00000615329 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
RPS6KC1-209ENST00000615329 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
RPS6KC1-209ENST00000615329 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
RPS6KC1-209ENST00000615329 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
RPS6KC1-209ENST00000615329 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
RPS6KC1-209ENST00000615329 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
RPS6KC1-209ENST00000615329 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
RPS6KC1-209ENST00000615329 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
RPS6KC1-209ENST00000615329 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 33.2 ms