RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 RNF213Q63HN8 5207 aa2.07□□□□□ -2.08
CCL16-206ENST00000613642 KRTAP10-4P60372 401 aaPredicted RBP2.07□□□□□ -2.08
CCL16-206ENST00000613642 LRP1Q07954 4544 aaKnown RBP2.06□□□□□ -2.08
CCL16-206ENST00000613642 MT1HL1P0DM35 61 aa2.06□□□□□ -2.08
CCL16-206ENST00000613642 LRP2P98164 4655 aa2.04□□□□□ -2.08
CCL16-206ENST00000613642 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
CCL16-206ENST00000613642 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
CCL16-206ENST00000613642 FAT3Q8TDW7 4589 aa2.03□□□□□ -2.08
CCL16-206ENST00000613642 PKHD1L1Q86WI1 4243 aa2.03□□□□□ -2.08
CCL16-206ENST00000613642 M0R2T5 61 aa2.02□□□□□ -2.09
CCL16-206ENST00000613642 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
CCL16-206ENST00000613642 KRTAP8-1Q8IUC2 63 aa2.02□□□□□ -2.09
CCL16-206ENST00000613642 TNXBP22105 4242 aa2.02□□□□□ -2.09
CCL16-206ENST00000613642 KRTAP2-3P0C7H8 128 aa2□□□□□ -2.09
CCL16-206ENST00000613642 KRTAP2-4Q9BYR9 128 aa2□□□□□ -2.09
CCL16-206ENST00000613642 KRTAP2-1Q9BYU5 128 aa2□□□□□ -2.09
CCL16-206ENST00000613642 CRCT1Q9UGL9 99 aa2□□□□□ -2.09
CCL16-206ENST00000613642 MUC2Q02817 5179 aa1.96□□□□□ -2.1
CCL16-206ENST00000613642 LPAP08519 4548 aa1.96□□□□□ -2.1
CCL16-206ENST00000613642 FSIP2Q5CZC0 6907 aa1.93□□□□□ -2.1
CCL16-206ENST00000613642 FAT4Q6V0I7 4981 aa1.92□□□□□ -2.1
CCL16-206ENST00000613642 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
CCL16-206ENST00000613642 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
CCL16-206ENST00000613642 FLGP20930 4061 aaPredicted RBP1.81□□□□□ -2.12
CCL16-206ENST00000613642 MUC17Q685J3 4493 aa1.79□□□□□ -2.12
CCL16-206ENST00000613642 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
CCL16-206ENST00000613642 MT1HP80294 61 aa1.78□□□□□ -2.12
CCL16-206ENST00000613642 KRTAP4-1Q9BYQ7 146 aa1.76□□□□□ -2.13
CCL16-206ENST00000613642 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
CCL16-206ENST00000613642 KRTAP19-2Q3LHN2 52 aa1.72□□□□□ -2.13
CCL16-206ENST00000613642 MACF1Q9UPN3 7388 aaKnown RBP1.69□□□□□ -2.14
CCL16-206ENST00000613642 PRM1P04553 51 aa1.69□□□□□ -2.14
CCL16-206ENST00000613642 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
CCL16-206ENST00000613642 SYNE2Q8WXH0 6885 aaKnown RBP1.67□□□□□ -2.14
CCL16-206ENST00000613642 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
CCL16-206ENST00000613642 KRTAP20-1Q3LI63 56 aa1.66□□□□□ -2.14
CCL16-206ENST00000613642 SPRR2GQ9BYE4 73 aa1.66□□□□□ -2.14
CCL16-206ENST00000613642 USH2AO75445 5202 aa1.65□□□□□ -2.15
CCL16-206ENST00000613642 SSPOA2VEC9 5147 aa1.63□□□□□ -2.15
CCL16-206ENST00000613642 KRTAP19-6Q3LI70 58 aa1.63□□□□□ -2.15
CCL16-206ENST00000613642 MT2AP02795 61 aa1.6□□□□□ -2.15
CCL16-206ENST00000613642 MT1AP04731 61 aa1.59□□□□□ -2.15
CCL16-206ENST00000613642 MT1FP04733 61 aa1.58□□□□□ -2.16
CCL16-206ENST00000613642 NEBP20929 6669 aa1.58□□□□□ -2.16
CCL16-206ENST00000613642 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CCL16-206ENST00000613642 MUC12Q9UKN1 5478 aa1.53□□□□□ -2.17
CCL16-206ENST00000613642 MT1EP04732 61 aa1.49□□□□□ -2.17
CCL16-206ENST00000613642 KRTAP19-8Q3LI54 63 aa1.49□□□□□ -2.17
CCL16-206ENST00000613642 MT1XP80297 61 aa1.48□□□□□ -2.17
CCL16-206ENST00000613642 SPRR2EP22531 72 aa1.47□□□□□ -2.17
CCL16-206ENST00000613642 SPRR2BP35325 72 aa1.47□□□□□ -2.17
CCL16-206ENST00000613642 SPRR2AP35326 72 aa1.47□□□□□ -2.17
CCL16-206ENST00000613642 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
CCL16-206ENST00000613642 KMT2DO14686 5537 aa1.45□□□□□ -2.18
CCL16-206ENST00000613642 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
CCL16-206ENST00000613642 MT1LQ93083 61 aa1.45□□□□□ -2.18
CCL16-206ENST00000613642 SPRR2FQ96RM1 72 aa1.45□□□□□ -2.18
CCL16-206ENST00000613642 SPRR2DP22532 72 aa1.43□□□□□ -2.18
CCL16-206ENST00000613642 KRTAP6-2Q3LI66 62 aa1.43□□□□□ -2.18
CCL16-206ENST00000613642 GPR98Q8WXG9 6306 aa1.43□□□□□ -2.18
CCL16-206ENST00000613642 MT1BP07438 61 aa1.39□□□□□ -2.19
CCL16-206ENST00000613642 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
CCL16-206ENST00000613642 KRTAP19-3Q7Z4W3 81 aa1.33□□□□□ -2.2
CCL16-206ENST00000613642 DSTQ03001 7570 aaKnown RBP1.32□□□□□ -2.2
CCL16-206ENST00000613642 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
CCL16-206ENST00000613642 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
CCL16-206ENST00000613642 MT4P47944 62 aa1.26□□□□□ -2.21
CCL16-206ENST00000613642 MT1GP13640 62 aa1.22□□□□□ -2.21
CCL16-206ENST00000613642 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
CCL16-206ENST00000613642 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
CCL16-206ENST00000613642 MT1MQ8N339 61 aa1.13□□□□□ -2.23
CCL16-206ENST00000613642 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
CCL16-206ENST00000613642 KRTAP6-1Q3LI64 71 aa1.09□□□□□ -2.23
CCL16-206ENST00000613642 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
CCL16-206ENST00000613642 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
CCL16-206ENST00000613642 MUC5BQ9HC84 5762 aaPredicted RBP0.99□□□□□ -2.25
CCL16-206ENST00000613642 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
CCL16-206ENST00000613642 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 48.1 ms