RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 USH2AO75445 5202 aa2.47□□□□□ -2.01
CSDE1-218ENST00000610726 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.01
CSDE1-218ENST00000610726 MT1EP04732 61 aa2.46□□□□□ -2.02
CSDE1-218ENST00000610726 MT1LQ93083 61 aa2.46□□□□□ -2.02
CSDE1-218ENST00000610726 SPRR2DP22532 72 aa2.45□□□□□ -2.02
CSDE1-218ENST00000610726 KRTAP19-3Q7Z4W3 81 aa2.45□□□□□ -2.02
CSDE1-218ENST00000610726 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
CSDE1-218ENST00000610726 LCE3BQ5TA77 95 aa2.44□□□□□ -2.02
CSDE1-218ENST00000610726 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
CSDE1-218ENST00000610726 DSTQ03001 7570 aaKnown RBP2.38□□□□□ -2.03
CSDE1-218ENST00000610726 KRTAP4-3Q9BYR4 195 aa2.37□□□□□ -2.03
CSDE1-218ENST00000610726 FCGBPQ9Y6R7 5405 aaPredicted RBP2.37□□□□□ -2.03
CSDE1-218ENST00000610726 MT1MQ8N339 61 aa2.36□□□□□ -2.03
CSDE1-218ENST00000610726 KMT2DO14686 5537 aa2.36□□□□□ -2.03
CSDE1-218ENST00000610726 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-218ENST00000610726 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
CSDE1-218ENST00000610726 SYNE2Q8WXH0 6885 aaKnown RBP2.32□□□□□ -2.04
CSDE1-218ENST00000610726 KRTAP9-6A0A140TA67 174 aa2.32□□□□□ -2.04
CSDE1-218ENST00000610726 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
CSDE1-218ENST00000610726 SSPOA2VEC9 5147 aa2.26□□□□□ -2.05
CSDE1-218ENST00000610726 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
CSDE1-218ENST00000610726 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
CSDE1-218ENST00000610726 KRTAP9-4Q9BYQ2 154 aa2.24□□□□□ -2.05
CSDE1-218ENST00000610726 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
CSDE1-218ENST00000610726 MT4P47944 62 aa2.21□□□□□ -2.06
CSDE1-218ENST00000610726 MACF1Q9UPN3 7388 aaKnown RBP2.21□□□□□ -2.06
CSDE1-218ENST00000610726 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
CSDE1-218ENST00000610726 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
CSDE1-218ENST00000610726 KRTAP9-7A8MTY7 169 aa2.17□□□□□ -2.06
CSDE1-218ENST00000610726 LCE5AQ5TCM9 118 aa2.16□□□□□ -2.06
CSDE1-218ENST00000610726 MT3P25713 68 aa2.15□□□□□ -2.07
CSDE1-218ENST00000610726 LCE1AQ5T7P2 110 aa2.15□□□□□ -2.07
CSDE1-218ENST00000610726 KRTAP6-3Q3LI67 103 aa2.14□□□□□ -2.07
CSDE1-218ENST00000610726 MT1AP04731 61 aa2.14□□□□□ -2.07
CSDE1-218ENST00000610726 KRTAP4-9Q9BYQ8 210 aa2.14□□□□□ -2.07
CSDE1-218ENST00000610726 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
CSDE1-218ENST00000610726 LCE1DQ5T752 114 aa2.12□□□□□ -2.07
CSDE1-218ENST00000610726 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
CSDE1-218ENST00000610726 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
CSDE1-218ENST00000610726 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
CSDE1-218ENST00000610726 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.08
CSDE1-218ENST00000610726 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
CSDE1-218ENST00000610726 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
CSDE1-218ENST00000610726 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
CSDE1-218ENST00000610726 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
CSDE1-218ENST00000610726 KRTAP6-2Q3LI66 62 aa2.01□□□□□ -2.09
CSDE1-218ENST00000610726 PRM1P04553 51 aa2□□□□□ -2.09
CSDE1-218ENST00000610726 KRTAP4-11Q9BYQ6 195 aa1.99□□□□□ -2.09
CSDE1-218ENST00000610726 KRTAP5-9P26371 169 aa1.97□□□□□ -2.09
CSDE1-218ENST00000610726 KRTAP2-2Q9BYT5 123 aa1.97□□□□□ -2.09
CSDE1-218ENST00000610726 NEBP20929 6669 aa1.94□□□□□ -2.1
CSDE1-218ENST00000610726 LCE4AQ5TA78 99 aa1.93□□□□□ -2.1
CSDE1-218ENST00000610726 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
CSDE1-218ENST00000610726 KRTAP20-2Q3LI61 65 aa1.76□□□□□ -2.13
CSDE1-218ENST00000610726 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
CSDE1-218ENST00000610726 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
CSDE1-218ENST00000610726 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
CSDE1-218ENST00000610726 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
CSDE1-218ENST00000610726 LCE1EQ5T753 118 aa1.62□□□□□ -2.15
CSDE1-218ENST00000610726 LCE1FQ5T754 118 aa1.62□□□□□ -2.15
CSDE1-218ENST00000610726 KRTAP5-4Q6L8H1 288 aa1.61□□□□□ -2.15
CSDE1-218ENST00000610726 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
CSDE1-218ENST00000610726 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
CSDE1-218ENST00000610726 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
CSDE1-218ENST00000610726 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
CSDE1-218ENST00000610726 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
CSDE1-218ENST00000610726 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
CSDE1-218ENST00000610726 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
CSDE1-218ENST00000610726 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.18
CSDE1-218ENST00000610726 KRTAP5-8O75690 187 aa1.37□□□□□ -2.19
CSDE1-218ENST00000610726 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
CSDE1-218ENST00000610726 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.2
CSDE1-218ENST00000610726 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
CSDE1-218ENST00000610726 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
CSDE1-218ENST00000610726 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
CSDE1-218ENST00000610726 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
CSDE1-218ENST00000610726 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms