RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
SYNPO2-206ENST00000610556 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
SYNPO2-206ENST00000610556 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
SYNPO2-206ENST00000610556 LOC100996750A0A140TA64 210 aa2.27□□□□□ -2.05
SYNPO2-206ENST00000610556 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
SYNPO2-206ENST00000610556 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
SYNPO2-206ENST00000610556 KRTAP19-4Q3LI73 84 aa2.25□□□□□ -2.05
SYNPO2-206ENST00000610556 LCE3BQ5TA77 95 aa2.25□□□□□ -2.05
SYNPO2-206ENST00000610556 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
SYNPO2-206ENST00000610556 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
SYNPO2-206ENST00000610556 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
SYNPO2-206ENST00000610556 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
SYNPO2-206ENST00000610556 KRTAP9-6A0A140TA67 174 aa2.18□□□□□ -2.06
SYNPO2-206ENST00000610556 MT1MQ8N339 61 aa2.18□□□□□ -2.06
SYNPO2-206ENST00000610556 KRTAP19-6Q3LI70 58 aa2.16□□□□□ -2.06
SYNPO2-206ENST00000610556 MUC12Q9UKN1 5478 aa2.15□□□□□ -2.07
SYNPO2-206ENST00000610556 LCE5AQ5TCM9 118 aa2.14□□□□□ -2.07
SYNPO2-206ENST00000610556 SYNE2Q8WXH0 6885 aaKnown RBP2.13□□□□□ -2.07
SYNPO2-206ENST00000610556 KRTAP4-9Q9BYQ8 210 aa2.11□□□□□ -2.07
SYNPO2-206ENST00000610556 KRTAP9-2Q9BYQ4 174 aa2.11□□□□□ -2.07
SYNPO2-206ENST00000610556 SPRR2EP22531 72 aa2.09□□□□□ -2.08
SYNPO2-206ENST00000610556 SPRR2BP35325 72 aa2.09□□□□□ -2.08
SYNPO2-206ENST00000610556 SPRR2AP35326 72 aa2.09□□□□□ -2.08
SYNPO2-206ENST00000610556 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
SYNPO2-206ENST00000610556 KRTAP2-2Q9BYT5 123 aa2.08□□□□□ -2.08
SYNPO2-206ENST00000610556 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
SYNPO2-206ENST00000610556 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
SYNPO2-206ENST00000610556 LCE4AQ5TA78 99 aa2.04□□□□□ -2.08
SYNPO2-206ENST00000610556 KRTAP9-4Q9BYQ2 154 aa2.04□□□□□ -2.08
SYNPO2-206ENST00000610556 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
SYNPO2-206ENST00000610556 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
SYNPO2-206ENST00000610556 SPRR2DP22532 72 aa1.99□□□□□ -2.09
SYNPO2-206ENST00000610556 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
SYNPO2-206ENST00000610556 PRM1P04553 51 aa1.98□□□□□ -2.09
SYNPO2-206ENST00000610556 KRTAP5-9P26371 169 aa1.98□□□□□ -2.09
SYNPO2-206ENST00000610556 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
SYNPO2-206ENST00000610556 KRTAP9-7A8MTY7 169 aa1.97□□□□□ -2.09
SYNPO2-206ENST00000610556 MT1AP04731 61 aa1.96□□□□□ -2.1
SYNPO2-206ENST00000610556 KRTAP9-9Q9BYP9 154 aa1.96□□□□□ -2.1
SYNPO2-206ENST00000610556 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
SYNPO2-206ENST00000610556 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.1
SYNPO2-206ENST00000610556 LCE1AQ5T7P2 110 aa1.9□□□□□ -2.11
SYNPO2-206ENST00000610556 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
SYNPO2-206ENST00000610556 MT3P25713 68 aa1.88□□□□□ -2.11
SYNPO2-206ENST00000610556 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
SYNPO2-206ENST00000610556 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.12
SYNPO2-206ENST00000610556 NEBP20929 6669 aa1.84□□□□□ -2.12
SYNPO2-206ENST00000610556 MT4P47944 62 aa1.84□□□□□ -2.12
SYNPO2-206ENST00000610556 LCE1DQ5T752 114 aa1.82□□□□□ -2.12
SYNPO2-206ENST00000610556 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.12
SYNPO2-206ENST00000610556 KRTAP20-1Q3LI63 56 aa1.78□□□□□ -2.12
SYNPO2-206ENST00000610556 KRTAP4-12Q9BQ66 201 aa1.73□□□□□ -2.13
SYNPO2-206ENST00000610556 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
SYNPO2-206ENST00000610556 KRTAP5-4Q6L8H1 288 aa1.7□□□□□ -2.14
SYNPO2-206ENST00000610556 KRTAP4-6Q9BYQ5 205 aa1.65□□□□□ -2.15
SYNPO2-206ENST00000610556 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.16
SYNPO2-206ENST00000610556 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
SYNPO2-206ENST00000610556 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
SYNPO2-206ENST00000610556 KRTAP5-3Q6L8H2 238 aa1.54□□□□□ -2.16
SYNPO2-206ENST00000610556 KRTAP4-11Q9BYQ6 195 aa1.51□□□□□ -2.17
SYNPO2-206ENST00000610556 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
SYNPO2-206ENST00000610556 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
SYNPO2-206ENST00000610556 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
SYNPO2-206ENST00000610556 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
SYNPO2-206ENST00000610556 KRTAP4-2Q9BYR5 136 aa1.35□□□□□ -2.19
SYNPO2-206ENST00000610556 KRTAP5-7Q6L8G8 165 aa1.34□□□□□ -2.19
SYNPO2-206ENST00000610556 KRTAP5-1Q6L8H4 278 aa1.34□□□□□ -2.2
SYNPO2-206ENST00000610556 KRTAP5-8O75690 187 aa1.31□□□□□ -2.2
SYNPO2-206ENST00000610556 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
SYNPO2-206ENST00000610556 LCE1CQ5T751 118 aa1.28□□□□□ -2.21
SYNPO2-206ENST00000610556 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
SYNPO2-206ENST00000610556 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.2□□□□□ -2.22
SYNPO2-206ENST00000610556 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
SYNPO2-206ENST00000610556 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
SYNPO2-206ENST00000610556 KRTAP5-11Q6L8G4 156 aa1.06□□□□□ -2.24
SYNPO2-206ENST00000610556 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
SYNPO2-206ENST00000610556 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 230.6 ms