RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 MT1BP07438 61 aa2.46□□□□□ -2.02
HDDC2-205ENST00000608456 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
HDDC2-205ENST00000608456 LCE3CQ5T5A8 94 aa2.43□□□□□ -2.02
HDDC2-205ENST00000608456 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
HDDC2-205ENST00000608456 ABCA13Q86UQ4 5058 aa2.42□□□□□ -2.02
HDDC2-205ENST00000608456 HERC2O95714 4834 aa2.37□□□□□ -2.03
HDDC2-205ENST00000608456 KRTAP2-3P0C7H8 128 aa2.34□□□□□ -2.03
HDDC2-205ENST00000608456 KRTAP2-4Q9BYR9 128 aa2.34□□□□□ -2.03
HDDC2-205ENST00000608456 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
HDDC2-205ENST00000608456 EPPK1P58107 5090 aaKnown RBP2.34□□□□□ -2.04
HDDC2-205ENST00000608456 KRTAP19-5Q3LI72 72 aa2.31□□□□□ -2.04
HDDC2-205ENST00000608456 HMCN2Q8NDA2 5059 aa2.31□□□□□ -2.04
HDDC2-205ENST00000608456 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
HDDC2-205ENST00000608456 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
HDDC2-205ENST00000608456 MUC2Q02817 5179 aa2.22□□□□□ -2.05
HDDC2-205ENST00000608456 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
HDDC2-205ENST00000608456 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
HDDC2-205ENST00000608456 MT1EP04732 61 aa2.19□□□□□ -2.06
HDDC2-205ENST00000608456 MT1LQ93083 61 aa2.17□□□□□ -2.06
HDDC2-205ENST00000608456 FAT4Q6V0I7 4981 aa2.15□□□□□ -2.06
HDDC2-205ENST00000608456 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
HDDC2-205ENST00000608456 UBR4Q5T4S7 5183 aa2.12□□□□□ -2.07
HDDC2-205ENST00000608456 MT1GP13640 62 aa2.07□□□□□ -2.08
HDDC2-205ENST00000608456 RNF213Q63HN8 5207 aa2.06□□□□□ -2.08
HDDC2-205ENST00000608456 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
HDDC2-205ENST00000608456 KRTAP5-9P26371 169 aa2.05□□□□□ -2.08
HDDC2-205ENST00000608456 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
HDDC2-205ENST00000608456 KRTAP19-6Q3LI70 58 aa2.04□□□□□ -2.08
HDDC2-205ENST00000608456 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
HDDC2-205ENST00000608456 MT1AP04731 61 aa2.02□□□□□ -2.09
HDDC2-205ENST00000608456 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
HDDC2-205ENST00000608456 MT1MQ8N339 61 aa1.99□□□□□ -2.09
HDDC2-205ENST00000608456 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
HDDC2-205ENST00000608456 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
HDDC2-205ENST00000608456 KRTAP4-3Q9BYR4 195 aa1.87□□□□□ -2.11
HDDC2-205ENST00000608456 USH2AO75445 5202 aa1.83□□□□□ -2.12
HDDC2-205ENST00000608456 SSPOA2VEC9 5147 aa1.82□□□□□ -2.12
HDDC2-205ENST00000608456 KRTAP5-5Q701N2 237 aaPredicted RBP1.81□□□□□ -2.12
HDDC2-205ENST00000608456 SPRR2FQ96RM1 72 aa1.8□□□□□ -2.12
HDDC2-205ENST00000608456 KMT2DO14686 5537 aa1.79□□□□□ -2.12
HDDC2-205ENST00000608456 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
HDDC2-205ENST00000608456 CRCT1Q9UGL9 99 aa1.77□□□□□ -2.13
HDDC2-205ENST00000608456 SYNE1Q8NF91 8797 aaKnown RBP1.76□□□□□ -2.13
HDDC2-205ENST00000608456 PRM1P04553 51 aa1.76□□□□□ -2.13
HDDC2-205ENST00000608456 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
HDDC2-205ENST00000608456 SPRR2AP35326 72 aa1.72□□□□□ -2.13
HDDC2-205ENST00000608456 KRTAP6-2Q3LI66 62 aa1.68□□□□□ -2.14
HDDC2-205ENST00000608456 KRTAP6-3Q3LI67 103 aa1.68□□□□□ -2.14
HDDC2-205ENST00000608456 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
HDDC2-205ENST00000608456 LCE1BQ5T7P3 118 aa1.68□□□□□ -2.14
HDDC2-205ENST00000608456 SPRR2EP22531 72 aa1.64□□□□□ -2.15
HDDC2-205ENST00000608456 SPRR2BP35325 72 aa1.63□□□□□ -2.15
HDDC2-205ENST00000608456 FCGBPQ9Y6R7 5405 aaPredicted RBP1.58□□□□□ -2.16
HDDC2-205ENST00000608456 MUC12Q9UKN1 5478 aa1.55□□□□□ -2.16
HDDC2-205ENST00000608456 SPRR2DP22532 72 aa1.53□□□□□ -2.16
HDDC2-205ENST00000608456 DSTQ03001 7570 aaKnown RBP1.52□□□□□ -2.17
HDDC2-205ENST00000608456 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
HDDC2-205ENST00000608456 MACF1Q9UPN3 7388 aaKnown RBP1.45□□□□□ -2.18
HDDC2-205ENST00000608456 FSIP2Q5CZC0 6907 aa1.4□□□□□ -2.19
HDDC2-205ENST00000608456 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
HDDC2-205ENST00000608456 KRTAP20-2Q3LI61 65 aa1.37□□□□□ -2.19
HDDC2-205ENST00000608456 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
HDDC2-205ENST00000608456 MDN1Q9NU22 5596 aa1.36□□□□□ -2.19
HDDC2-205ENST00000608456 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
HDDC2-205ENST00000608456 KRTAP20-1Q3LI63 56 aa1.33□□□□□ -2.2
HDDC2-205ENST00000608456 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
HDDC2-205ENST00000608456 MT4P47944 62 aa1.24□□□□□ -2.21
HDDC2-205ENST00000608456 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
HDDC2-205ENST00000608456 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
HDDC2-205ENST00000608456 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
HDDC2-205ENST00000608456 NEBP20929 6669 aa1.14□□□□□ -2.23
HDDC2-205ENST00000608456 HMCN1Q96RW7 5635 aa1.08□□□□□ -2.24
HDDC2-205ENST00000608456 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
HDDC2-205ENST00000608456 MUC5BQ9HC84 5762 aaPredicted RBP0.91□□□□□ -2.26
HDDC2-205ENST00000608456 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
HDDC2-205ENST00000608456 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
HDDC2-205ENST00000608456 GPR98Q8WXG9 6306 aa0.67□□□□□ -2.3
HDDC2-205ENST00000608456 AHNAKQ09666 5890 aaKnown RBP0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms