RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 UBR4Q5T4S7 5183 aa2.75□□□□□ -1.97
SRGAP2-211ENST00000604423 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
SRGAP2-211ENST00000604423 MUC17Q685J3 4493 aa2.72□□□□□ -1.97
SRGAP2-211ENST00000604423 KRTAP4-1Q9BYQ7 146 aa2.71□□□□□ -1.98
SRGAP2-211ENST00000604423 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
SRGAP2-211ENST00000604423 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
SRGAP2-211ENST00000604423 KRTAP19-2Q3LHN2 52 aa2.66□□□□□ -1.98
SRGAP2-211ENST00000604423 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
SRGAP2-211ENST00000604423 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
SRGAP2-211ENST00000604423 HMCN2Q8NDA2 5059 aa2.63□□□□□ -1.99
SRGAP2-211ENST00000604423 FLGP20930 4061 aaPredicted RBP2.61□□□□□ -1.99
SRGAP2-211ENST00000604423 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
SRGAP2-211ENST00000604423 SPRR2GQ9BYE4 73 aa2.59□□□□□ -2
SRGAP2-211ENST00000604423 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
SRGAP2-211ENST00000604423 RNF213Q63HN8 5207 aa2.55□□□□□ -2
SRGAP2-211ENST00000604423 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
SRGAP2-211ENST00000604423 M0R2T5 61 aa2.53□□□□□ -2
SRGAP2-211ENST00000604423 KRTAP12-3P60328 96 aa2.53□□□□□ -2
SRGAP2-211ENST00000604423 CRCT1Q9UGL9 99 aa2.51□□□□□ -2.01
SRGAP2-211ENST00000604423 KRTAP10-10P60014 251 aa2.47□□□□□ -2.01
SRGAP2-211ENST00000604423 MUC2Q02817 5179 aa2.45□□□□□ -2.02
SRGAP2-211ENST00000604423 FAT4Q6V0I7 4981 aa2.43□□□□□ -2.02
SRGAP2-211ENST00000604423 MT1FP04733 61 aa2.42□□□□□ -2.02
SRGAP2-211ENST00000604423 MT1XP80297 61 aa2.42□□□□□ -2.02
SRGAP2-211ENST00000604423 KRTAP19-8Q3LI54 63 aa2.42□□□□□ -2.02
SRGAP2-211ENST00000604423 MT2AP02795 61 aa2.41□□□□□ -2.02
SRGAP2-211ENST00000604423 MT1HP80294 61 aa2.39□□□□□ -2.03
SRGAP2-211ENST00000604423 MT1BP07438 61 aa2.37□□□□□ -2.03
SRGAP2-211ENST00000604423 KRTAP19-5Q3LI72 72 aa2.33□□□□□ -2.04
SRGAP2-211ENST00000604423 KRTAP2-3P0C7H8 128 aa2.28□□□□□ -2.04
SRGAP2-211ENST00000604423 KRTAP2-4Q9BYR9 128 aa2.28□□□□□ -2.04
SRGAP2-211ENST00000604423 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
SRGAP2-211ENST00000604423 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
SRGAP2-211ENST00000604423 FSIP2Q5CZC0 6907 aa2.24□□□□□ -2.05
SRGAP2-211ENST00000604423 MACF1Q9UPN3 7388 aaKnown RBP2.23□□□□□ -2.05
SRGAP2-211ENST00000604423 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
SRGAP2-211ENST00000604423 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
SRGAP2-211ENST00000604423 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
SRGAP2-211ENST00000604423 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
SRGAP2-211ENST00000604423 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
SRGAP2-211ENST00000604423 MT1LQ93083 61 aa2.12□□□□□ -2.07
SRGAP2-211ENST00000604423 KMT2DO14686 5537 aa2.11□□□□□ -2.07
SRGAP2-211ENST00000604423 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
SRGAP2-211ENST00000604423 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.08
SRGAP2-211ENST00000604423 MT1EP04732 61 aa2.08□□□□□ -2.08
SRGAP2-211ENST00000604423 NEBP20929 6669 aa2.06□□□□□ -2.08
SRGAP2-211ENST00000604423 USH2AO75445 5202 aa2.04□□□□□ -2.08
SRGAP2-211ENST00000604423 FCGBPQ9Y6R7 5405 aaPredicted RBP2.03□□□□□ -2.08
SRGAP2-211ENST00000604423 SYNE2Q8WXH0 6885 aaKnown RBP2.03□□□□□ -2.08
SRGAP2-211ENST00000604423 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
SRGAP2-211ENST00000604423 MT1GP13640 62 aa2.01□□□□□ -2.09
SRGAP2-211ENST00000604423 KRTAP20-1Q3LI63 56 aa2□□□□□ -2.09
SRGAP2-211ENST00000604423 KRTAP19-6Q3LI70 58 aa1.95□□□□□ -2.1
SRGAP2-211ENST00000604423 MT1MQ8N339 61 aa1.94□□□□□ -2.1
SRGAP2-211ENST00000604423 KRTAP19-3Q7Z4W3 81 aa1.92□□□□□ -2.1
SRGAP2-211ENST00000604423 PRM1P04553 51 aa1.9□□□□□ -2.11
SRGAP2-211ENST00000604423 MT1AP04731 61 aa1.9□□□□□ -2.11
SRGAP2-211ENST00000604423 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
SRGAP2-211ENST00000604423 MUC12Q9UKN1 5478 aa1.83□□□□□ -2.12
SRGAP2-211ENST00000604423 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
SRGAP2-211ENST00000604423 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
SRGAP2-211ENST00000604423 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
SRGAP2-211ENST00000604423 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
SRGAP2-211ENST00000604423 SPRR2FQ96RM1 72 aa1.76□□□□□ -2.13
SRGAP2-211ENST00000604423 SYNE1Q8NF91 8797 aaKnown RBP1.76□□□□□ -2.13
SRGAP2-211ENST00000604423 SPRR2EP22531 72 aa1.76□□□□□ -2.13
SRGAP2-211ENST00000604423 SPRR2BP35325 72 aa1.76□□□□□ -2.13
SRGAP2-211ENST00000604423 SPRR2AP35326 72 aa1.76□□□□□ -2.13
SRGAP2-211ENST00000604423 DSTQ03001 7570 aaKnown RBP1.72□□□□□ -2.13
SRGAP2-211ENST00000604423 SPRR2DP22532 72 aa1.7□□□□□ -2.14
SRGAP2-211ENST00000604423 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
SRGAP2-211ENST00000604423 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
SRGAP2-211ENST00000604423 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
SRGAP2-211ENST00000604423 MT4P47944 62 aa1.49□□□□□ -2.17
SRGAP2-211ENST00000604423 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
SRGAP2-211ENST00000604423 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
SRGAP2-211ENST00000604423 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
SRGAP2-211ENST00000604423 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 71.4 ms