RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 AEBP2Q6ZN18 517 aaPredicted RBP20.34■□□□□ 0.85
SRGAP2-211ENST00000604423 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
SRGAP2-211ENST00000604423 PHF23Q9BUL5 403 aaPredicted RBP17.25■□□□□ 0.35
SRGAP2-211ENST00000604423 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
SRGAP2-211ENST00000604423 FOXD1Q16676 465 aa16.07■□□□□ 0.16
SRGAP2-211ENST00000604423 PLPPR3Q6T4P5 718 aa15.81■□□□□ 0.12
SRGAP2-211ENST00000604423 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
SRGAP2-211ENST00000604423 ADRA2BP18089 450 aa15.32■□□□□ 0.04
SRGAP2-211ENST00000604423 PIAS4Q8N2W9 510 aaPredicted RBP15.15■□□□□ 0.02
SRGAP2-211ENST00000604423 MSH5O43196 834 aa14.85□□□□□ -0.03
SRGAP2-211ENST00000604423 POTEDQ86YR6 584 aa14□□□□□ -0.17
SRGAP2-211ENST00000604423 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
SRGAP2-211ENST00000604423 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
SRGAP2-211ENST00000604423 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
SRGAP2-211ENST00000604423 DMRT2Q9Y5R5 561 aa13.71□□□□□ -0.21
SRGAP2-211ENST00000604423 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
SRGAP2-211ENST00000604423 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
SRGAP2-211ENST00000604423 KCNA4P22459 653 aa13.4□□□□□ -0.26
SRGAP2-211ENST00000604423 HOXD11P31277 338 aaPredicted RBP13.32□□□□□ -0.28
SRGAP2-211ENST00000604423 RNF216Q9NWF9 866 aaPredicted RBP13.32□□□□□ -0.28
SRGAP2-211ENST00000604423 NPM3O75607 178 aaKnown RBP13.31□□□□□ -0.28
SRGAP2-211ENST00000604423 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
SRGAP2-211ENST00000604423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.36
SRGAP2-211ENST00000604423 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
SRGAP2-211ENST00000604423 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
SRGAP2-211ENST00000604423 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
SRGAP2-211ENST00000604423 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
SRGAP2-211ENST00000604423 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
SRGAP2-211ENST00000604423 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
SRGAP2-211ENST00000604423 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
SRGAP2-211ENST00000604423 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
SRGAP2-211ENST00000604423 ZBTB22O15209 634 aa12.33□□□□□ -0.44
SRGAP2-211ENST00000604423 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
SRGAP2-211ENST00000604423 CAPN15O75808 1086 aa12.27□□□□□ -0.44
SRGAP2-211ENST00000604423 MYCNP04198 464 aaPredicted RBP12.27□□□□□ -0.44
SRGAP2-211ENST00000604423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.23□□□□□ -0.45
SRGAP2-211ENST00000604423 HNRNPUL2Q1KMD3 747 aaKnown RBP12.23□□□□□ -0.45
SRGAP2-211ENST00000604423 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
SRGAP2-211ENST00000604423 EHMT2Q96KQ7 1210 aa12.18□□□□□ -0.46
SRGAP2-211ENST00000604423 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
SRGAP2-211ENST00000604423 APLP2Q06481 763 aa12.13□□□□□ -0.47
SRGAP2-211ENST00000604423 DSG3P32926 999 aa12.06□□□□□ -0.48
SRGAP2-211ENST00000604423 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
SRGAP2-211ENST00000604423 ABCB7O75027 752 aa12.05□□□□□ -0.48
SRGAP2-211ENST00000604423 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
SRGAP2-211ENST00000604423 ATF5Q9Y2D1 282 aaPredicted RBP12.04□□□□□ -0.48
SRGAP2-211ENST00000604423 NISCHQ9Y2I1 1504 aa11.94□□□□□ -0.5
SRGAP2-211ENST00000604423 POLA2Q14181 598 aa11.89□□□□□ -0.51
SRGAP2-211ENST00000604423 ATXN8OSP0DMR3 200 aa11.84□□□□□ -0.51
SRGAP2-211ENST00000604423 ZBTB12Q9Y330 459 aaPredicted RBP11.57□□□□□ -0.56
SRGAP2-211ENST00000604423 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
SRGAP2-211ENST00000604423 FBLN2P98095 1184 aa11.48□□□□□ -0.57
SRGAP2-211ENST00000604423 MKRN4PQ13434 485 aaPredicted RBP11.47□□□□□ -0.57
SRGAP2-211ENST00000604423 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
SRGAP2-211ENST00000604423 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
SRGAP2-211ENST00000604423 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
SRGAP2-211ENST00000604423 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
SRGAP2-211ENST00000604423 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
SRGAP2-211ENST00000604423 ZNF692Q9BU19 519 aaPredicted RBP11.25□□□□□ -0.61
SRGAP2-211ENST00000604423 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
SRGAP2-211ENST00000604423 SSUH2Q9Y2M2 353 aa11.15□□□□□ -0.62
SRGAP2-211ENST00000604423 CHRDL2Q6WN34 429 aa11.12□□□□□ -0.63
SRGAP2-211ENST00000604423 PABPN1Q86U42 306 aaKnown RBP eCLIP11.11□□□□□ -0.63
SRGAP2-211ENST00000604423 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
SRGAP2-211ENST00000604423 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
SRGAP2-211ENST00000604423 CLEC11AQ9Y240 323 aa11.08□□□□□ -0.64
SRGAP2-211ENST00000604423 POTEHQ6S545 545 aa11.04□□□□□ -0.64
SRGAP2-211ENST00000604423 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
SRGAP2-211ENST00000604423 FKBP8Q14318 412 aa10.95□□□□□ -0.66
SRGAP2-211ENST00000604423 PIP4P2Q8N4L2 257 aa10.93□□□□□ -0.66
SRGAP2-211ENST00000604423 PRR29P0C7W0 189 aa10.88□□□□□ -0.67
SRGAP2-211ENST00000604423 FXR2P51116 673 aaKnown RBP eCLIP10.87□□□□□ -0.67
SRGAP2-211ENST00000604423 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
SRGAP2-211ENST00000604423 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
SRGAP2-211ENST00000604423 HRCP23327 699 aa10.79□□□□□ -0.68
SRGAP2-211ENST00000604423 PROM2Q8N271 834 aa10.79□□□□□ -0.68
SRGAP2-211ENST00000604423 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
SRGAP2-211ENST00000604423 HAX1O00165 279 aa10.68□□□□□ -0.7
SRGAP2-211ENST00000604423 CREBZFQ9NS37 354 aa10.66□□□□□ -0.7
SRGAP2-211ENST00000604423 PELP1Q8IZL8 1130 aaKnown RBP10.62□□□□□ -0.71
SRGAP2-211ENST00000604423 FARP1Q9Y4F1 1045 aaPredicted RBP10.62□□□□□ -0.71
SRGAP2-211ENST00000604423 MIER1Q8N108 512 aa10.58□□□□□ -0.72
SRGAP2-211ENST00000604423 EVX2Q03828 476 aa10.58□□□□□ -0.72
SRGAP2-211ENST00000604423 PLCD3Q8N3E9 789 aa10.55□□□□□ -0.72
SRGAP2-211ENST00000604423 SHROOM4Q9ULL8 1493 aa10.54□□□□□ -0.72
SRGAP2-211ENST00000604423 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
SRGAP2-211ENST00000604423 C19orf67A6NJJ6 358 aa10.51□□□□□ -0.73
SRGAP2-211ENST00000604423 SUPT5HO00267 1087 aaKnown RBP10.51□□□□□ -0.73
SRGAP2-211ENST00000604423 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
SRGAP2-211ENST00000604423 MNX1P50219 401 aaPredicted RBP10.51□□□□□ -0.73
SRGAP2-211ENST00000604423 CD44P16070 742 aaKnown RBP10.5□□□□□ -0.73
SRGAP2-211ENST00000604423 PLEKHG5O94827 1062 aa10.5□□□□□ -0.73
SRGAP2-211ENST00000604423 SP7Q8TDD2 431 aaPredicted RBP10.49□□□□□ -0.73
SRGAP2-211ENST00000604423 PPARGC1BQ86YN6 1023 aaKnown RBP10.47□□□□□ -0.73
SRGAP2-211ENST00000604423 MYO15BQ96JP2 1530 aa10.46□□□□□ -0.73
SRGAP2-211ENST00000604423 NPM1P06748 294 aaKnown RBP eCLIP10.45□□□□□ -0.74
SRGAP2-211ENST00000604423 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
SRGAP2-211ENST00000604423 ZRANB1Q9UGI0 708 aa10.41□□□□□ -0.74
SRGAP2-211ENST00000604423 TSPYL2Q9H2G4 693 aaPredicted RBP10.38□□□□□ -0.75
SRGAP2-211ENST00000604423 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms