RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 DMAC1Q96GE9 116 aa1.42□□□□□ -2.18
CKS1BP3-201ENST00000600888 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
CKS1BP3-201ENST00000600888 A0A1B0GU33 70 aa1.41□□□□□ -2.18
CKS1BP3-201ENST00000600888 C20orf197Q8N268 126 aa1.41□□□□□ -2.18
CKS1BP3-201ENST00000600888 TRAV7A0A075B6U4 112 aa1.4□□□□□ -2.19
CKS1BP3-201ENST00000600888 PRO2289Q9P1D8 64 aa1.4□□□□□ -2.19
CKS1BP3-201ENST00000600888 SCGB1A1P11684 91 aa1.39□□□□□ -2.19
CKS1BP3-201ENST00000600888 SMIM20Q8N5G0 67 aa1.39□□□□□ -2.19
CKS1BP3-201ENST00000600888 DSTQ03001 7570 aaKnown RBP1.38□□□□□ -2.19
CKS1BP3-201ENST00000600888 ACYP2P14621 99 aa1.38□□□□□ -2.19
CKS1BP3-201ENST00000600888 MT1XP80297 61 aa1.38□□□□□ -2.19
CKS1BP3-201ENST00000600888 PLAC4Q8WY50 150 aa1.38□□□□□ -2.19
CKS1BP3-201ENST00000600888 K7ERU9 68 aa1.37□□□□□ -2.19
CKS1BP3-201ENST00000600888 M0QZ58 72 aa1.37□□□□□ -2.19
CKS1BP3-201ENST00000600888 MT-ATP8P03928 68 aa1.36□□□□□ -2.19
CKS1BP3-201ENST00000600888 SPTSSBQ8NFR3 76 aa1.36□□□□□ -2.19
CKS1BP3-201ENST00000600888 KRTAP25-1Q3LHN0 102 aa1.35□□□□□ -2.19
CKS1BP3-201ENST00000600888 KRTAP8-1Q8IUC2 63 aa1.34□□□□□ -2.19
CKS1BP3-201ENST00000600888 SPRR2FQ96RM1 72 aa1.34□□□□□ -2.19
CKS1BP3-201ENST00000600888 KRTAP2-1Q9BYU5 128 aa1.34□□□□□ -2.19
CKS1BP3-201ENST00000600888 RPS28P62857 69 aaKnown RBP1.33□□□□□ -2.2
CKS1BP3-201ENST00000600888 A6NED7 52 aa1.32□□□□□ -2.2
CKS1BP3-201ENST00000600888 CHKB-CPT1BH3BT56 60 aa1.32□□□□□ -2.2
CKS1BP3-201ENST00000600888 SPRR2EP22531 72 aa1.32□□□□□ -2.2
CKS1BP3-201ENST00000600888 SPRR2BP35325 72 aa1.32□□□□□ -2.2
CKS1BP3-201ENST00000600888 SPRR2AP35326 72 aa1.32□□□□□ -2.2
CKS1BP3-201ENST00000600888 LINC01554Q52M75 96 aa1.32□□□□□ -2.2
CKS1BP3-201ENST00000600888 SERP2Q8N6R1 65 aa1.32□□□□□ -2.2
CKS1BP3-201ENST00000600888 SNURFQ9Y675 71 aa1.32□□□□□ -2.2
CKS1BP3-201ENST00000600888 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
CKS1BP3-201ENST00000600888 KTN1-AS1Q86SY8 53 aa1.31□□□□□ -2.2
CKS1BP3-201ENST00000600888 KRTAP13-4Q3LI77 160 aa1.3□□□□□ -2.2
CKS1BP3-201ENST00000600888 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
CKS1BP3-201ENST00000600888 COX7CP15954 63 aa1.28□□□□□ -2.2
CKS1BP3-201ENST00000600888 COA5Q86WW8 74 aa1.28□□□□□ -2.2
CKS1BP3-201ENST00000600888 H7BZZ5 65 aa1.27□□□□□ -2.21
CKS1BP3-201ENST00000600888 SPRR2DP22532 72 aa1.27□□□□□ -2.21
CKS1BP3-201ENST00000600888 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
CKS1BP3-201ENST00000600888 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
CKS1BP3-201ENST00000600888 SERP1Q9Y6X1 66 aa1.26□□□□□ -2.21
CKS1BP3-201ENST00000600888 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
CKS1BP3-201ENST00000600888 KRTAP19-7Q3SYF9 63 aa1.25□□□□□ -2.21
CKS1BP3-201ENST00000600888 CYSTM1Q9H1C7 97 aa1.24□□□□□ -2.21
CKS1BP3-201ENST00000600888 MT1EP04732 61 aa1.23□□□□□ -2.21
CKS1BP3-201ENST00000600888 SPATA8Q6RVD6 105 aa1.23□□□□□ -2.21
CKS1BP3-201ENST00000600888 KRTAP19-3Q7Z4W3 81 aa1.23□□□□□ -2.21
CKS1BP3-201ENST00000600888 A0A0D9SG42 100 aa1.22□□□□□ -2.21
CKS1BP3-201ENST00000600888 A0A1B0GU69 56 aa1.22□□□□□ -2.21
CKS1BP3-201ENST00000600888 MT1GP13640 62 aa1.21□□□□□ -2.22
CKS1BP3-201ENST00000600888 ATP5EP56381 51 aaPredicted RBP1.2□□□□□ -2.22
CKS1BP3-201ENST00000600888 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
CKS1BP3-201ENST00000600888 KRTAP19-5Q3LI72 72 aa1.19□□□□□ -2.22
CKS1BP3-201ENST00000600888 PRR15LQ9BU68 103 aa1.19□□□□□ -2.22
CKS1BP3-201ENST00000600888 CCDC179H3BU77 68 aa1.18□□□□□ -2.22
CKS1BP3-201ENST00000600888 TNP1P09430 55 aa1.18□□□□□ -2.22
CKS1BP3-201ENST00000600888 ROMO1P60602 79 aa1.18□□□□□ -2.22
CKS1BP3-201ENST00000600888 MT1LQ93083 61 aa1.18□□□□□ -2.22
CKS1BP3-201ENST00000600888 C10orf95Q9H7T3 257 aa1.18□□□□□ -2.22
CKS1BP3-201ENST00000600888 LINC01558Q9Y6Z2 57 aa1.18□□□□□ -2.22
CKS1BP3-201ENST00000600888 MT1MQ8N339 61 aa1.17□□□□□ -2.22
CKS1BP3-201ENST00000600888 TMEM258P61165 79 aa1.16□□□□□ -2.22
CKS1BP3-201ENST00000600888 UQCR11O14957 56 aa1.15□□□□□ -2.23
CKS1BP3-201ENST00000600888 Q1T7F1 81 aa1.14□□□□□ -2.23
CKS1BP3-201ENST00000600888 MIR22HGQ0VDD5 57 aa1.11□□□□□ -2.23
CKS1BP3-201ENST00000600888 SYNE1Q8NF91 8797 aaKnown RBP1.11□□□□□ -2.23
CKS1BP3-201ENST00000600888 MT4P47944 62 aa1.1□□□□□ -2.23
CKS1BP3-201ENST00000600888 BRK1Q8WUW1 75 aa1.07□□□□□ -2.24
CKS1BP3-201ENST00000600888 KRTAP20-2Q3LI61 65 aa1.06□□□□□ -2.24
CKS1BP3-201ENST00000600888 INE1O15225 51 aa1.04□□□□□ -2.24
CKS1BP3-201ENST00000600888 CDC42SE1Q9NRR8 79 aa1.03□□□□□ -2.24
CKS1BP3-201ENST00000600888 MT1AP04731 61 aa1.01□□□□□ -2.25
CKS1BP3-201ENST00000600888 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
CKS1BP3-201ENST00000600888 KRTAP6-2Q3LI66 62 aa0.94□□□□□ -2.26
CKS1BP3-201ENST00000600888 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
CKS1BP3-201ENST00000600888 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
CKS1BP3-201ENST00000600888 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
CKS1BP3-201ENST00000600888 PRM1P04553 51 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 102.4 ms