RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 KRTAP19-3Q7Z4W3 81 aa7.24□□□□□ -1.25
GRAMD1A-212ENST00000600231 KRTAP4-3Q9BYR4 195 aa7.22□□□□□ -1.25
GRAMD1A-212ENST00000600231 MACF1Q9UPN3 7388 aaKnown RBP7.19□□□□□ -1.26
GRAMD1A-212ENST00000600231 MT1GP13640 62 aa7.19□□□□□ -1.26
GRAMD1A-212ENST00000600231 MT1MQ8N339 61 aa7.18□□□□□ -1.26
GRAMD1A-212ENST00000600231 KRTAP9-2Q9BYQ4 174 aa7.17□□□□□ -1.26
GRAMD1A-212ENST00000600231 SPRR2FQ96RM1 72 aa7.16□□□□□ -1.26
GRAMD1A-212ENST00000600231 KRTAP2-3P0C7H8 128 aa7.09□□□□□ -1.27
GRAMD1A-212ENST00000600231 KRTAP2-4Q9BYR9 128 aa7.09□□□□□ -1.27
GRAMD1A-212ENST00000600231 KRTAP2-1Q9BYU5 128 aa7.09□□□□□ -1.27
GRAMD1A-212ENST00000600231 LOC100996750A0A140TA64 210 aa7.09□□□□□ -1.27
GRAMD1A-212ENST00000600231 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
GRAMD1A-212ENST00000600231 INE1O15225 51 aa7.01□□□□□ -1.29
GRAMD1A-212ENST00000600231 CRCT1Q9UGL9 99 aa6.98□□□□□ -1.29
GRAMD1A-212ENST00000600231 SYNE2Q8WXH0 6885 aaKnown RBP6.97□□□□□ -1.29
GRAMD1A-212ENST00000600231 DSTQ03001 7570 aaKnown RBP6.96□□□□□ -1.29
GRAMD1A-212ENST00000600231 MDN1Q9NU22 5596 aa6.81□□□□□ -1.32
GRAMD1A-212ENST00000600231 KRTAP5-9P26371 169 aa6.81□□□□□ -1.32
GRAMD1A-212ENST00000600231 LCE1AQ5T7P2 110 aa6.75□□□□□ -1.33
GRAMD1A-212ENST00000600231 SPRR2EP22531 72 aa6.61□□□□□ -1.35
GRAMD1A-212ENST00000600231 SPRR2BP35325 72 aa6.61□□□□□ -1.35
GRAMD1A-212ENST00000600231 SPRR2AP35326 72 aa6.61□□□□□ -1.35
GRAMD1A-212ENST00000600231 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.44□□□□□ -1.38
GRAMD1A-212ENST00000600231 KRTAP6-1Q3LI64 71 aa6.44□□□□□ -1.38
GRAMD1A-212ENST00000600231 LCE3BQ5TA77 95 aa6.42□□□□□ -1.38
GRAMD1A-212ENST00000600231 KRTAP6-3Q3LI67 103 aa6.4□□□□□ -1.39
GRAMD1A-212ENST00000600231 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.39
GRAMD1A-212ENST00000600231 MT1AP04731 61 aa6.39□□□□□ -1.39
GRAMD1A-212ENST00000600231 SYNE1Q8NF91 8797 aaKnown RBP6.35□□□□□ -1.39
GRAMD1A-212ENST00000600231 SPRR2DP22532 72 aa6.33□□□□□ -1.4
GRAMD1A-212ENST00000600231 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
GRAMD1A-212ENST00000600231 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
GRAMD1A-212ENST00000600231 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
GRAMD1A-212ENST00000600231 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
GRAMD1A-212ENST00000600231 LCE3DQ9BYE3 92 aa5.96□□□□□ -1.45
GRAMD1A-212ENST00000600231 NEBP20929 6669 aa5.94□□□□□ -1.46
GRAMD1A-212ENST00000600231 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
GRAMD1A-212ENST00000600231 LCE3EQ5T5B0 92 aa5.85□□□□□ -1.47
GRAMD1A-212ENST00000600231 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.47
GRAMD1A-212ENST00000600231 KRTAP5-4Q6L8H1 288 aa5.81□□□□□ -1.48
GRAMD1A-212ENST00000600231 MT3P25713 68 aa5.76□□□□□ -1.49
GRAMD1A-212ENST00000600231 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
GRAMD1A-212ENST00000600231 KRTAP4-6Q9BYQ5 205 aa5.61□□□□□ -1.51
GRAMD1A-212ENST00000600231 MT4P47944 62 aa5.58□□□□□ -1.52
GRAMD1A-212ENST00000600231 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
GRAMD1A-212ENST00000600231 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
GRAMD1A-212ENST00000600231 PRM1P04553 51 aa5.42□□□□□ -1.54
GRAMD1A-212ENST00000600231 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
GRAMD1A-212ENST00000600231 KRTAP5-2Q701N4 177 aa5.36□□□□□ -1.55
GRAMD1A-212ENST00000600231 HMCN1Q96RW7 5635 aa5.36□□□□□ -1.55
GRAMD1A-212ENST00000600231 LCE1DQ5T752 114 aa5.34□□□□□ -1.56
GRAMD1A-212ENST00000600231 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
GRAMD1A-212ENST00000600231 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
GRAMD1A-212ENST00000600231 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
GRAMD1A-212ENST00000600231 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
GRAMD1A-212ENST00000600231 LCE1BQ5T7P3 118 aa4.7□□□□□ -1.66
GRAMD1A-212ENST00000600231 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
GRAMD1A-212ENST00000600231 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
GRAMD1A-212ENST00000600231 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
GRAMD1A-212ENST00000600231 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
GRAMD1A-212ENST00000600231 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
GRAMD1A-212ENST00000600231 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
GRAMD1A-212ENST00000600231 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
GRAMD1A-212ENST00000600231 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
GRAMD1A-212ENST00000600231 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
GRAMD1A-212ENST00000600231 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
GRAMD1A-212ENST00000600231 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
GRAMD1A-212ENST00000600231 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
GRAMD1A-212ENST00000600231 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
GRAMD1A-212ENST00000600231 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
GRAMD1A-212ENST00000600231 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
GRAMD1A-212ENST00000600231 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
GRAMD1A-212ENST00000600231 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
GRAMD1A-212ENST00000600231 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
GRAMD1A-212ENST00000600231 PHGR1C9JFL3 82 aa3.4□□□□□ -1.86
GRAMD1A-212ENST00000600231 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
GRAMD1A-212ENST00000600231 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
GRAMD1A-212ENST00000600231 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms