RNA–Protein interactions for RNA: ENST00000600166.1

CFTR-208, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 5

Gene CFTR, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-208ENST00000600166 MUC17Q685J3 4493 aa2.86□□□□□ -1.95
CFTR-208ENST00000600166 KRTAP19-2Q3LHN2 52 aa2.84□□□□□ -1.95
CFTR-208ENST00000600166 SPRR2GQ9BYE4 73 aa2.83□□□□□ -1.96
CFTR-208ENST00000600166 UBR4Q5T4S7 5183 aa2.8□□□□□ -1.96
CFTR-208ENST00000600166 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
CFTR-208ENST00000600166 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
CFTR-208ENST00000600166 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
CFTR-208ENST00000600166 RNF213Q63HN8 5207 aa2.74□□□□□ -1.97
CFTR-208ENST00000600166 M0R2T5 61 aa2.72□□□□□ -1.97
CFTR-208ENST00000600166 MUC2Q02817 5179 aa2.72□□□□□ -1.97
CFTR-208ENST00000600166 KRTAP12-3P60328 96 aa2.71□□□□□ -1.98
CFTR-208ENST00000600166 MT1HP80294 61 aa2.71□□□□□ -1.98
CFTR-208ENST00000600166 FAT4Q6V0I7 4981 aa2.69□□□□□ -1.98
CFTR-208ENST00000600166 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
CFTR-208ENST00000600166 KRTAP19-8Q3LI54 63 aa2.65□□□□□ -1.99
CFTR-208ENST00000600166 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
CFTR-208ENST00000600166 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
CFTR-208ENST00000600166 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
CFTR-208ENST00000600166 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
CFTR-208ENST00000600166 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
CFTR-208ENST00000600166 MT2AP02795 61 aa2.57□□□□□ -2
CFTR-208ENST00000600166 MT1FP04733 61 aa2.55□□□□□ -2
CFTR-208ENST00000600166 MT1XP80297 61 aa2.53□□□□□ -2
CFTR-208ENST00000600166 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
CFTR-208ENST00000600166 MT1BP07438 61 aa2.46□□□□□ -2.02
CFTR-208ENST00000600166 KRTAP19-5Q3LI72 72 aa2.44□□□□□ -2.02
CFTR-208ENST00000600166 CRCT1Q9UGL9 99 aa2.4□□□□□ -2.03
CFTR-208ENST00000600166 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.03
CFTR-208ENST00000600166 MT1EP04732 61 aa2.33□□□□□ -2.04
CFTR-208ENST00000600166 USH2AO75445 5202 aa2.32□□□□□ -2.04
CFTR-208ENST00000600166 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
CFTR-208ENST00000600166 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
CFTR-208ENST00000600166 MT1LQ93083 61 aa2.28□□□□□ -2.04
CFTR-208ENST00000600166 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
CFTR-208ENST00000600166 SSPOA2VEC9 5147 aa2.26□□□□□ -2.05
CFTR-208ENST00000600166 FSIP2Q5CZC0 6907 aa2.25□□□□□ -2.05
CFTR-208ENST00000600166 KRTAP19-7Q3SYF9 63 aa2.25□□□□□ -2.05
CFTR-208ENST00000600166 MT1AP04731 61 aa2.24□□□□□ -2.05
CFTR-208ENST00000600166 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
CFTR-208ENST00000600166 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
CFTR-208ENST00000600166 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
CFTR-208ENST00000600166 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
CFTR-208ENST00000600166 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
CFTR-208ENST00000600166 MT1GP13640 62 aa2.09□□□□□ -2.07
CFTR-208ENST00000600166 SPRR2FQ96RM1 72 aa2.08□□□□□ -2.08
CFTR-208ENST00000600166 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
CFTR-208ENST00000600166 KMT2DO14686 5537 aa2.05□□□□□ -2.08
CFTR-208ENST00000600166 PRM1P04553 51 aa2.01□□□□□ -2.09
CFTR-208ENST00000600166 SPRR2EP22531 72 aa2.01□□□□□ -2.09
CFTR-208ENST00000600166 SPRR2BP35325 72 aa2.01□□□□□ -2.09
CFTR-208ENST00000600166 SPRR2AP35326 72 aa2.01□□□□□ -2.09
CFTR-208ENST00000600166 MT1MQ8N339 61 aa2.01□□□□□ -2.09
CFTR-208ENST00000600166 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
CFTR-208ENST00000600166 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
CFTR-208ENST00000600166 SPRR2DP22532 72 aa1.94□□□□□ -2.1
CFTR-208ENST00000600166 MUC12Q9UKN1 5478 aa1.94□□□□□ -2.1
CFTR-208ENST00000600166 KRTAP20-1Q3LI63 56 aa1.9□□□□□ -2.11
CFTR-208ENST00000600166 NEBP20929 6669 aa1.89□□□□□ -2.11
CFTR-208ENST00000600166 MDN1Q9NU22 5596 aa1.87□□□□□ -2.11
CFTR-208ENST00000600166 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
CFTR-208ENST00000600166 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
CFTR-208ENST00000600166 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
CFTR-208ENST00000600166 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
CFTR-208ENST00000600166 DSTQ03001 7570 aaKnown RBP1.78□□□□□ -2.12
CFTR-208ENST00000600166 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
CFTR-208ENST00000600166 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
CFTR-208ENST00000600166 MT4P47944 62 aa1.7□□□□□ -2.14
CFTR-208ENST00000600166 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
CFTR-208ENST00000600166 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CFTR-208ENST00000600166 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
CFTR-208ENST00000600166 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
CFTR-208ENST00000600166 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
CFTR-208ENST00000600166 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
CFTR-208ENST00000600166 MUC5ACP98088 5654 aa1.34□□□□□ -2.19
CFTR-208ENST00000600166 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.23
CFTR-208ENST00000600166 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
CFTR-208ENST00000600166 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
CFTR-208ENST00000600166 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 80.6 ms