RNA–Protein interactions for RNA: ENST00000600166.1

CFTR-208, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 5

Gene CFTR, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-208ENST00000600166 AEBP2Q6ZN18 517 aaPredicted RBP20.24■□□□□ 0.83
CFTR-208ENST00000600166 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
CFTR-208ENST00000600166 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
CFTR-208ENST00000600166 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
CFTR-208ENST00000600166 FOXD1Q16676 465 aa16.05■□□□□ 0.16
CFTR-208ENST00000600166 PLPPR3Q6T4P5 718 aa15.54■□□□□ 0.08
CFTR-208ENST00000600166 PPP6R1Q9UPN7 881 aa15.12■□□□□ 0.01
CFTR-208ENST00000600166 ADRA2BP18089 450 aa15.08■□□□□ 0
CFTR-208ENST00000600166 PIAS4Q8N2W9 510 aaPredicted RBP15.03■□□□□ -0
CFTR-208ENST00000600166 MSH5O43196 834 aa14.96□□□□□ -0.01
CFTR-208ENST00000600166 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
CFTR-208ENST00000600166 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
CFTR-208ENST00000600166 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
CFTR-208ENST00000600166 DMRT2Q9Y5R5 561 aa13.7□□□□□ -0.22
CFTR-208ENST00000600166 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
CFTR-208ENST00000600166 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
CFTR-208ENST00000600166 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
CFTR-208ENST00000600166 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
CFTR-208ENST00000600166 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
CFTR-208ENST00000600166 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
CFTR-208ENST00000600166 NPM3O75607 178 aaKnown RBP12.97□□□□□ -0.33
CFTR-208ENST00000600166 KCNA4P22459 653 aa12.85□□□□□ -0.35
CFTR-208ENST00000600166 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
CFTR-208ENST00000600166 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
CFTR-208ENST00000600166 CACNB1Q02641 598 aaPredicted RBP12.74□□□□□ -0.37
CFTR-208ENST00000600166 NISCHQ9Y2I1 1504 aa12.69□□□□□ -0.38
CFTR-208ENST00000600166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.62□□□□□ -0.39
CFTR-208ENST00000600166 C1QBPQ07021 282 aaKnown RBP12.61□□□□□ -0.39
CFTR-208ENST00000600166 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
CFTR-208ENST00000600166 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
CFTR-208ENST00000600166 SLC4A1APQ9BWU0 796 aaKnown RBP12.25□□□□□ -0.45
CFTR-208ENST00000600166 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
CFTR-208ENST00000600166 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
CFTR-208ENST00000600166 CAPN15O75808 1086 aa12.11□□□□□ -0.47
CFTR-208ENST00000600166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
CFTR-208ENST00000600166 HNRNPUL2Q1KMD3 747 aaKnown RBP12.07□□□□□ -0.48
CFTR-208ENST00000600166 APLP2Q06481 763 aa12.05□□□□□ -0.48
CFTR-208ENST00000600166 DSG3P32926 999 aa12.02□□□□□ -0.49
CFTR-208ENST00000600166 SAMD1Q6SPF0 538 aaPredicted RBP12.02□□□□□ -0.49
CFTR-208ENST00000600166 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
CFTR-208ENST00000600166 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
CFTR-208ENST00000600166 FOXD4L1Q9NU39 408 aa11.95□□□□□ -0.5
CFTR-208ENST00000600166 ZNF219Q9P2Y4 722 aaPredicted RBP11.95□□□□□ -0.5
CFTR-208ENST00000600166 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
CFTR-208ENST00000600166 MYT1Q01538 1121 aa11.93□□□□□ -0.5
CFTR-208ENST00000600166 ABCB7O75027 752 aa11.85□□□□□ -0.51
CFTR-208ENST00000600166 CSRNP3Q8WYN3 585 aa11.84□□□□□ -0.51
CFTR-208ENST00000600166 ZBTB22O15209 634 aa11.83□□□□□ -0.52
CFTR-208ENST00000600166 HRCP23327 699 aa11.7□□□□□ -0.54
CFTR-208ENST00000600166 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
CFTR-208ENST00000600166 POLA2Q14181 598 aa11.67□□□□□ -0.54
CFTR-208ENST00000600166 ATXN8OSP0DMR3 200 aa11.58□□□□□ -0.56
CFTR-208ENST00000600166 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
CFTR-208ENST00000600166 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.57
CFTR-208ENST00000600166 TTBK1Q5TCY1 1321 aaPredicted RBP11.4□□□□□ -0.58
CFTR-208ENST00000600166 OSCARQ8IYS5 282 aa11.3□□□□□ -0.6
CFTR-208ENST00000600166 DCAF1Q9Y4B6 1507 aa11.29□□□□□ -0.6
CFTR-208ENST00000600166 POTEHQ6S545 545 aa11.26□□□□□ -0.61
CFTR-208ENST00000600166 ZEB1P37275 1124 aaPredicted RBP11.24□□□□□ -0.61
CFTR-208ENST00000600166 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
CFTR-208ENST00000600166 FBLN2P98095 1184 aa11.23□□□□□ -0.61
CFTR-208ENST00000600166 CCDC180Q9P1Z9 1646 aa11.18□□□□□ -0.62
CFTR-208ENST00000600166 MKRN4PQ13434 485 aaPredicted RBP11.18□□□□□ -0.62
CFTR-208ENST00000600166 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
CFTR-208ENST00000600166 REM2Q8IYK8 340 aaPredicted RBP11.13□□□□□ -0.63
CFTR-208ENST00000600166 SPDYE2BA6NHP3 402 aa11.12□□□□□ -0.63
CFTR-208ENST00000600166 SPDYE6P0CI01 402 aa11.12□□□□□ -0.63
CFTR-208ENST00000600166 SPDYE2Q495Y8 402 aa11.12□□□□□ -0.63
CFTR-208ENST00000600166 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
CFTR-208ENST00000600166 PCGF6Q9BYE7 350 aa11□□□□□ -0.65
CFTR-208ENST00000600166 ZNF692Q9BU19 519 aaPredicted RBP10.99□□□□□ -0.65
CFTR-208ENST00000600166 SSUH2Q9Y2M2 353 aa10.99□□□□□ -0.65
CFTR-208ENST00000600166 MYO15BQ96JP2 1530 aa10.98□□□□□ -0.65
CFTR-208ENST00000600166 TRIM26Q12899 539 aaPredicted RBP10.97□□□□□ -0.65
CFTR-208ENST00000600166 PIP4P2Q8N4L2 257 aa10.92□□□□□ -0.66
CFTR-208ENST00000600166 PPARGC1BQ86YN6 1023 aaKnown RBP10.89□□□□□ -0.67
CFTR-208ENST00000600166 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
CFTR-208ENST00000600166 SPDYE1Q8NFV5 336 aaPredicted RBP10.88□□□□□ -0.67
CFTR-208ENST00000600166 ABCC9O60706 1549 aa10.86□□□□□ -0.67
CFTR-208ENST00000600166 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
CFTR-208ENST00000600166 CLEC11AQ9Y240 323 aa10.84□□□□□ -0.67
CFTR-208ENST00000600166 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
CFTR-208ENST00000600166 CENPBP07199 599 aaPredicted RBP10.8□□□□□ -0.68
CFTR-208ENST00000600166 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
CFTR-208ENST00000600166 ZCCHC6Q5VYS8 1495 aaKnown RBP10.76□□□□□ -0.69
CFTR-208ENST00000600166 CLSPNQ9HAW4 1339 aa10.74□□□□□ -0.69
CFTR-208ENST00000600166 PRKAR2AP13861 404 aaKnown RBP10.72□□□□□ -0.69
CFTR-208ENST00000600166 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
CFTR-208ENST00000600166 PRR29P0C7W0 189 aa10.68□□□□□ -0.7
CFTR-208ENST00000600166 HAX1O00165 279 aa10.67□□□□□ -0.7
CFTR-208ENST00000600166 FKBP8Q14318 412 aa10.66□□□□□ -0.7
CFTR-208ENST00000600166 SUPT5HO00267 1087 aaKnown RBP10.65□□□□□ -0.7
CFTR-208ENST00000600166 SP7Q8TDD2 431 aaPredicted RBP10.64□□□□□ -0.71
CFTR-208ENST00000600166 CHADLQ6NUI6 762 aa10.63□□□□□ -0.71
CFTR-208ENST00000600166 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
CFTR-208ENST00000600166 NEUROD1Q13562 356 aa10.57□□□□□ -0.72
CFTR-208ENST00000600166 GTF3C3Q9Y5Q9 886 aa10.57□□□□□ -0.72
CFTR-208ENST00000600166 EVX2Q03828 476 aa10.56□□□□□ -0.72
CFTR-208ENST00000600166 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
CFTR-208ENST00000600166 PROM2Q8N271 834 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 225.9 ms