RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 MT1EP04732 61 aa4.96□□□□□ -1.61
SYMPK-213ENST00000599460 MT1LQ93083 61 aa4.95□□□□□ -1.62
SYMPK-213ENST00000599460 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
SYMPK-213ENST00000599460 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
SYMPK-213ENST00000599460 MUC2Q02817 5179 aa4.89□□□□□ -1.63
SYMPK-213ENST00000599460 MT1MQ8N339 61 aa4.79□□□□□ -1.64
SYMPK-213ENST00000599460 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
SYMPK-213ENST00000599460 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.66
SYMPK-213ENST00000599460 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
SYMPK-213ENST00000599460 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
SYMPK-213ENST00000599460 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.66
SYMPK-213ENST00000599460 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
SYMPK-213ENST00000599460 MT4P47944 62 aa4.59□□□□□ -1.67
SYMPK-213ENST00000599460 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
SYMPK-213ENST00000599460 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
SYMPK-213ENST00000599460 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
SYMPK-213ENST00000599460 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
SYMPK-213ENST00000599460 MT3P25713 68 aa4.44□□□□□ -1.7
SYMPK-213ENST00000599460 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
SYMPK-213ENST00000599460 USH2AO75445 5202 aa4.39□□□□□ -1.71
SYMPK-213ENST00000599460 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
SYMPK-213ENST00000599460 MT1AP04731 61 aa4.37□□□□□ -1.71
SYMPK-213ENST00000599460 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
SYMPK-213ENST00000599460 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
SYMPK-213ENST00000599460 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
SYMPK-213ENST00000599460 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
SYMPK-213ENST00000599460 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
SYMPK-213ENST00000599460 PRM1P04553 51 aa4.21□□□□□ -1.74
SYMPK-213ENST00000599460 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
SYMPK-213ENST00000599460 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
SYMPK-213ENST00000599460 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
SYMPK-213ENST00000599460 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
SYMPK-213ENST00000599460 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
SYMPK-213ENST00000599460 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
SYMPK-213ENST00000599460 KMT2DO14686 5537 aa4.16□□□□□ -1.74
SYMPK-213ENST00000599460 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.75
SYMPK-213ENST00000599460 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
SYMPK-213ENST00000599460 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
SYMPK-213ENST00000599460 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
SYMPK-213ENST00000599460 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
SYMPK-213ENST00000599460 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
SYMPK-213ENST00000599460 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
SYMPK-213ENST00000599460 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
SYMPK-213ENST00000599460 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.79
SYMPK-213ENST00000599460 NEBP20929 6669 aa3.82□□□□□ -1.8
SYMPK-213ENST00000599460 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
SYMPK-213ENST00000599460 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
SYMPK-213ENST00000599460 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
SYMPK-213ENST00000599460 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
SYMPK-213ENST00000599460 KRTAP4-6Q9BYQ5 205 aa3.64□□□□□ -1.83
SYMPK-213ENST00000599460 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
SYMPK-213ENST00000599460 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
SYMPK-213ENST00000599460 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
SYMPK-213ENST00000599460 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
SYMPK-213ENST00000599460 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
SYMPK-213ENST00000599460 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
SYMPK-213ENST00000599460 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
SYMPK-213ENST00000599460 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
SYMPK-213ENST00000599460 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
SYMPK-213ENST00000599460 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
SYMPK-213ENST00000599460 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
SYMPK-213ENST00000599460 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
SYMPK-213ENST00000599460 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
SYMPK-213ENST00000599460 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
SYMPK-213ENST00000599460 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
SYMPK-213ENST00000599460 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
SYMPK-213ENST00000599460 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
SYMPK-213ENST00000599460 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
SYMPK-213ENST00000599460 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
SYMPK-213ENST00000599460 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
SYMPK-213ENST00000599460 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
SYMPK-213ENST00000599460 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
SYMPK-213ENST00000599460 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SYMPK-213ENST00000599460 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
SYMPK-213ENST00000599460 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
SYMPK-213ENST00000599460 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
SYMPK-213ENST00000599460 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 82.5 ms