RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
LINC00343-205ENST00000598229 TRAV7A0A075B6U4 112 aa3.1□□□□□ -1.91
LINC00343-205ENST00000598229 MP68P56378 58 aa3.09□□□□□ -1.91
LINC00343-205ENST00000598229 SPTSSBQ8NFR3 76 aa3.07□□□□□ -1.92
LINC00343-205ENST00000598229 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
LINC00343-205ENST00000598229 HIST1H4AP62805 103 aaKnown RBP3.05□□□□□ -1.92
LINC00343-205ENST00000598229 KRTAP13-4Q3LI77 160 aa3.05□□□□□ -1.92
LINC00343-205ENST00000598229 ATP5EP2Q5VTU8 51 aa3.04□□□□□ -1.92
LINC00343-205ENST00000598229 H3BPC8 53 aa3.03□□□□□ -1.92
LINC00343-205ENST00000598229 OCR1Q9BZK8 76 aa3.02□□□□□ -1.93
LINC00343-205ENST00000598229 ACYP2P14621 99 aa3.01□□□□□ -1.93
LINC00343-205ENST00000598229 C10orf95Q9H7T3 257 aa3.01□□□□□ -1.93
LINC00343-205ENST00000598229 KRTAP5-8O75690 187 aa3□□□□□ -1.93
LINC00343-205ENST00000598229 ETDBQ3ZM63 59 aa2.96□□□□□ -1.94
LINC00343-205ENST00000598229 F8W1H4 67 aa2.95□□□□□ -1.94
LINC00343-205ENST00000598229 SMIM6P0DI80 62 aa2.95□□□□□ -1.94
LINC00343-205ENST00000598229 FAM240AA0A1B0GVK7 77 aa2.92□□□□□ -1.94
LINC00343-205ENST00000598229 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
LINC00343-205ENST00000598229 CHKB-CPT1BH3BT56 60 aa2.91□□□□□ -1.94
LINC00343-205ENST00000598229 SPINT4Q6UDR6 99 aa2.89□□□□□ -1.95
LINC00343-205ENST00000598229 GTF2H5Q6ZYL4 71 aa2.88□□□□□ -1.95
LINC00343-205ENST00000598229 COL5A1-AS1Q5SY13 56 aa2.87□□□□□ -1.95
LINC00343-205ENST00000598229 LINC00643Q86TS7 51 aa2.87□□□□□ -1.95
LINC00343-205ENST00000598229 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
LINC00343-205ENST00000598229 TNP1P09430 55 aa2.85□□□□□ -1.95
LINC00343-205ENST00000598229 KRTAP12-1P59990 96 aa2.85□□□□□ -1.95
LINC00343-205ENST00000598229 SPATA8Q6RVD6 105 aa2.8□□□□□ -1.96
LINC00343-205ENST00000598229 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
LINC00343-205ENST00000598229 SCGB1A1P11684 91 aa2.77□□□□□ -1.97
LINC00343-205ENST00000598229 MT1AP04731 61 aa2.75□□□□□ -1.97
LINC00343-205ENST00000598229 A0A1B0GU33 70 aa2.74□□□□□ -1.97
LINC00343-205ENST00000598229 SEC61GP60059 68 aa2.74□□□□□ -1.97
LINC00343-205ENST00000598229 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
LINC00343-205ENST00000598229 SERP1Q9Y6X1 66 aa2.74□□□□□ -1.97
LINC00343-205ENST00000598229 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
LINC00343-205ENST00000598229 SPANXA2-OT1Q8N9U9 137 aa2.68□□□□□ -1.98
LINC00343-205ENST00000598229 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
LINC00343-205ENST00000598229 SMIM26A0A096LP01 95 aa2.67□□□□□ -1.98
LINC00343-205ENST00000598229 SMIM20Q8N5G0 67 aa2.63□□□□□ -1.99
LINC00343-205ENST00000598229 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
LINC00343-205ENST00000598229 COA5Q86WW8 74 aa2.59□□□□□ -1.99
LINC00343-205ENST00000598229 SNURFQ9Y675 71 aa2.58□□□□□ -2
LINC00343-205ENST00000598229 LOC105371267A0A1B0GV96 52 aa2.57□□□□□ -2
LINC00343-205ENST00000598229 SERP2Q8N6R1 65 aa2.52□□□□□ -2.01
LINC00343-205ENST00000598229 A0A1B0GU69 56 aa2.47□□□□□ -2.01
LINC00343-205ENST00000598229 J3QR89 54 aa2.46□□□□□ -2.02
LINC00343-205ENST00000598229 PCP4L1A6NKN8 68 aa2.39□□□□□ -2.03
LINC00343-205ENST00000598229 H7BZZ5 65 aa2.35□□□□□ -2.03
LINC00343-205ENST00000598229 PRR15LQ9BU68 103 aa2.35□□□□□ -2.03
LINC00343-205ENST00000598229 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
LINC00343-205ENST00000598229 A0A1B0GV90 55 aa2.25□□□□□ -2.05
LINC00343-205ENST00000598229 UQCR11O14957 56 aa2.21□□□□□ -2.06
LINC00343-205ENST00000598229 K7ERS5 55 aa2.16□□□□□ -2.06
LINC00343-205ENST00000598229 LINC01558Q9Y6Z2 57 aa2.16□□□□□ -2.06
LINC00343-205ENST00000598229 COX7CP15954 63 aa2.15□□□□□ -2.07
LINC00343-205ENST00000598229 K7ERU9 68 aa2.14□□□□□ -2.07
LINC00343-205ENST00000598229 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
LINC00343-205ENST00000598229 RPS28P62857 69 aaKnown RBP2.13□□□□□ -2.07
LINC00343-205ENST00000598229 MIR22HGQ0VDD5 57 aa2.09□□□□□ -2.07
LINC00343-205ENST00000598229 V9GYY9 64 aa2.02□□□□□ -2.09
LINC00343-205ENST00000598229 CDC42SE1Q9NRR8 79 aa1.97□□□□□ -2.09
LINC00343-205ENST00000598229 ATP5EP56381 51 aaPredicted RBP1.95□□□□□ -2.1
LINC00343-205ENST00000598229 Q1T7F1 81 aa1.94□□□□□ -2.1
LINC00343-205ENST00000598229 ANAPC13Q9BS18 74 aa1.93□□□□□ -2.1
LINC00343-205ENST00000598229 ROMO1P60602 79 aa1.91□□□□□ -2.1
LINC00343-205ENST00000598229 PSPHP1O15172 72 aa1.9□□□□□ -2.11
LINC00343-205ENST00000598229 PRO0628Q9UI54 55 aa1.86□□□□□ -2.11
LINC00343-205ENST00000598229 TMEM258P61165 79 aa1.83□□□□□ -2.12
LINC00343-205ENST00000598229 CCDC179H3BU77 68 aa1.77□□□□□ -2.13
LINC00343-205ENST00000598229 LUZP6Q538Z0 58 aa1.77□□□□□ -2.13
LINC00343-205ENST00000598229 PMAIP1Q13794 54 aa1.73□□□□□ -2.13
LINC00343-205ENST00000598229 A6NED7 52 aa1.69□□□□□ -2.14
LINC00343-205ENST00000598229 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
LINC00343-205ENST00000598229 BRK1Q8WUW1 75 aa1.64□□□□□ -2.15
LINC00343-205ENST00000598229 KTN1-AS1Q86SY8 53 aa1.59□□□□□ -2.15
LINC00343-205ENST00000598229 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
LINC00343-205ENST00000598229 INE1O15225 51 aa1.16□□□□□ -2.22
LINC00343-205ENST00000598229 PRM1P04553 51 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 50.1 ms