RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 MUC17Q685J3 4493 aa2.57□□□□□ -2
VMP1-215ENST00000592619 RNF213Q63HN8 5207 aa2.55□□□□□ -2
VMP1-215ENST00000592619 KRTAP12-1P59990 96 aa2.54□□□□□ -2
VMP1-215ENST00000592619 TP53AIP1Q9HCN2 124 aa2.54□□□□□ -2
VMP1-215ENST00000592619 MUC2Q02817 5179 aa2.51□□□□□ -2.01
VMP1-215ENST00000592619 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
VMP1-215ENST00000592619 H0YAA0 97 aa2.49□□□□□ -2.01
VMP1-215ENST00000592619 FAT4Q6V0I7 4981 aa2.47□□□□□ -2.01
VMP1-215ENST00000592619 C9orf92A6NGG3 77 aa2.45□□□□□ -2.02
VMP1-215ENST00000592619 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
VMP1-215ENST00000592619 C10orf95Q9H7T3 257 aa2.4□□□□□ -2.03
VMP1-215ENST00000592619 KRTAP4-1Q9BYQ7 146 aa2.39□□□□□ -2.03
VMP1-215ENST00000592619 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
VMP1-215ENST00000592619 MMP24-AS1A0A0U1RRL7 71 aa2.35□□□□□ -2.03
VMP1-215ENST00000592619 H1FX-AS1Q4G0G2 97 aa2.35□□□□□ -2.03
VMP1-215ENST00000592619 WFDC13Q8IUB5 93 aa2.34□□□□□ -2.03
VMP1-215ENST00000592619 KRTAP19-2Q3LHN2 52 aa2.33□□□□□ -2.04
VMP1-215ENST00000592619 FLGP20930 4061 aaPredicted RBP2.33□□□□□ -2.04
VMP1-215ENST00000592619 MT1HP80294 61 aa2.3□□□□□ -2.04
VMP1-215ENST00000592619 M0R2T5 61 aa2.26□□□□□ -2.05
VMP1-215ENST00000592619 FSIP2Q5CZC0 6907 aa2.17□□□□□ -2.06
VMP1-215ENST00000592619 MT2AP02795 61 aa2.16□□□□□ -2.06
VMP1-215ENST00000592619 S4R3F8 94 aa2.16□□□□□ -2.06
VMP1-215ENST00000592619 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
VMP1-215ENST00000592619 MT1FP04733 61 aa2.14□□□□□ -2.07
VMP1-215ENST00000592619 USH2AO75445 5202 aa2.14□□□□□ -2.07
VMP1-215ENST00000592619 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
VMP1-215ENST00000592619 A0A0D9SG42 100 aa2.12□□□□□ -2.07
VMP1-215ENST00000592619 CRCT1Q9UGL9 99 aa2.1□□□□□ -2.07
VMP1-215ENST00000592619 SPRR2GQ9BYE4 73 aa2.05□□□□□ -2.08
VMP1-215ENST00000592619 MACF1Q9UPN3 7388 aaKnown RBP2.03□□□□□ -2.08
VMP1-215ENST00000592619 KRTAP19-8Q3LI54 63 aa2.02□□□□□ -2.09
VMP1-215ENST00000592619 FCGBPQ9Y6R7 5405 aaPredicted RBP2.01□□□□□ -2.09
VMP1-215ENST00000592619 KRTAP19-6Q3LI70 58 aa2.01□□□□□ -2.09
VMP1-215ENST00000592619 MT1BP07438 61 aa1.99□□□□□ -2.09
VMP1-215ENST00000592619 SYNE2Q8WXH0 6885 aaKnown RBP1.97□□□□□ -2.09
VMP1-215ENST00000592619 M0QZ58 72 aa1.96□□□□□ -2.1
VMP1-215ENST00000592619 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
VMP1-215ENST00000592619 MT1XP80297 61 aa1.89□□□□□ -2.11
VMP1-215ENST00000592619 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
VMP1-215ENST00000592619 KMT2DO14686 5537 aa1.85□□□□□ -2.11
VMP1-215ENST00000592619 NEBP20929 6669 aa1.84□□□□□ -2.12
VMP1-215ENST00000592619 MDN1Q9NU22 5596 aa1.8□□□□□ -2.12
VMP1-215ENST00000592619 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
VMP1-215ENST00000592619 SPRR2FQ96RM1 72 aa1.76□□□□□ -2.13
VMP1-215ENST00000592619 TNP1P09430 55 aa1.72□□□□□ -2.13
VMP1-215ENST00000592619 SPRR2EP22531 72 aa1.72□□□□□ -2.13
VMP1-215ENST00000592619 SPRR2BP35325 72 aa1.72□□□□□ -2.13
VMP1-215ENST00000592619 SPRR2AP35326 72 aa1.72□□□□□ -2.13
VMP1-215ENST00000592619 KRTAP20-1Q3LI63 56 aa1.68□□□□□ -2.14
VMP1-215ENST00000592619 KRTAP19-7Q3SYF9 63 aa1.68□□□□□ -2.14
VMP1-215ENST00000592619 MT1EP04732 61 aa1.67□□□□□ -2.14
VMP1-215ENST00000592619 SPRR2DP22532 72 aa1.67□□□□□ -2.14
VMP1-215ENST00000592619 KRTAP2-3P0C7H8 128 aa1.66□□□□□ -2.14
VMP1-215ENST00000592619 KRTAP2-4Q9BYR9 128 aa1.66□□□□□ -2.14
VMP1-215ENST00000592619 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
VMP1-215ENST00000592619 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
VMP1-215ENST00000592619 KRTAP2-1Q9BYU5 128 aa1.64□□□□□ -2.15
VMP1-215ENST00000592619 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
VMP1-215ENST00000592619 MT1GP13640 62 aa1.62□□□□□ -2.15
VMP1-215ENST00000592619 MT1LQ93083 61 aa1.6□□□□□ -2.15
VMP1-215ENST00000592619 MT1MQ8N339 61 aa1.58□□□□□ -2.16
VMP1-215ENST00000592619 PRM1P04553 51 aa1.43□□□□□ -2.18
VMP1-215ENST00000592619 MT4P47944 62 aa1.43□□□□□ -2.18
VMP1-215ENST00000592619 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
VMP1-215ENST00000592619 SYNE1Q8NF91 8797 aaKnown RBP1.42□□□□□ -2.18
VMP1-215ENST00000592619 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
VMP1-215ENST00000592619 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
VMP1-215ENST00000592619 MT1AP04731 61 aa1.37□□□□□ -2.19
VMP1-215ENST00000592619 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
VMP1-215ENST00000592619 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
VMP1-215ENST00000592619 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
VMP1-215ENST00000592619 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
VMP1-215ENST00000592619 MUC5ACP98088 5654 aa1.15□□□□□ -2.23
VMP1-215ENST00000592619 MUC5BQ9HC84 5762 aaPredicted RBP1.13□□□□□ -2.23
VMP1-215ENST00000592619 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
VMP1-215ENST00000592619 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
VMP1-215ENST00000592619 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms