RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
PRKAR1A-217ENST00000589228 SPRR2EP22531 72 aa3.94□□□□□ -1.78
PRKAR1A-217ENST00000589228 SPRR2BP35325 72 aa3.94□□□□□ -1.78
PRKAR1A-217ENST00000589228 SPRR2AP35326 72 aa3.94□□□□□ -1.78
PRKAR1A-217ENST00000589228 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
PRKAR1A-217ENST00000589228 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
PRKAR1A-217ENST00000589228 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
PRKAR1A-217ENST00000589228 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
PRKAR1A-217ENST00000589228 LCE2AQ5TA79 106 aaPredicted RBP3.91□□□□□ -1.78
PRKAR1A-217ENST00000589228 KMT2DO14686 5537 aa3.87□□□□□ -1.79
PRKAR1A-217ENST00000589228 MT1MQ8N339 61 aa3.83□□□□□ -1.8
PRKAR1A-217ENST00000589228 KRTAP19-6Q3LI70 58 aa3.81□□□□□ -1.8
PRKAR1A-217ENST00000589228 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
PRKAR1A-217ENST00000589228 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
PRKAR1A-217ENST00000589228 SPRR2DP22532 72 aa3.77□□□□□ -1.81
PRKAR1A-217ENST00000589228 SYNE2Q8WXH0 6885 aaKnown RBP3.75□□□□□ -1.81
PRKAR1A-217ENST00000589228 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
PRKAR1A-217ENST00000589228 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
PRKAR1A-217ENST00000589228 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.83
PRKAR1A-217ENST00000589228 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.83
PRKAR1A-217ENST00000589228 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
PRKAR1A-217ENST00000589228 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
PRKAR1A-217ENST00000589228 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.84
PRKAR1A-217ENST00000589228 PRM1P04553 51 aa3.52□□□□□ -1.85
PRKAR1A-217ENST00000589228 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
PRKAR1A-217ENST00000589228 MT3P25713 68 aa3.47□□□□□ -1.85
PRKAR1A-217ENST00000589228 MT1AP04731 61 aa3.47□□□□□ -1.85
PRKAR1A-217ENST00000589228 MT4P47944 62 aa3.46□□□□□ -1.86
PRKAR1A-217ENST00000589228 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
PRKAR1A-217ENST00000589228 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
PRKAR1A-217ENST00000589228 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
PRKAR1A-217ENST00000589228 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
PRKAR1A-217ENST00000589228 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
PRKAR1A-217ENST00000589228 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
PRKAR1A-217ENST00000589228 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
PRKAR1A-217ENST00000589228 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
PRKAR1A-217ENST00000589228 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
PRKAR1A-217ENST00000589228 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
PRKAR1A-217ENST00000589228 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
PRKAR1A-217ENST00000589228 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
PRKAR1A-217ENST00000589228 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.14□□□□□ -1.91
PRKAR1A-217ENST00000589228 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
PRKAR1A-217ENST00000589228 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
PRKAR1A-217ENST00000589228 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
PRKAR1A-217ENST00000589228 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
PRKAR1A-217ENST00000589228 LCE4AQ5TA78 99 aa2.9□□□□□ -1.94
PRKAR1A-217ENST00000589228 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
PRKAR1A-217ENST00000589228 NEBP20929 6669 aa2.87□□□□□ -1.95
PRKAR1A-217ENST00000589228 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
PRKAR1A-217ENST00000589228 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
PRKAR1A-217ENST00000589228 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
PRKAR1A-217ENST00000589228 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
PRKAR1A-217ENST00000589228 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
PRKAR1A-217ENST00000589228 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
PRKAR1A-217ENST00000589228 LCE1CQ5T751 118 aa2.58□□□□□ -2
PRKAR1A-217ENST00000589228 LCE1EQ5T753 118 aa2.58□□□□□ -2
PRKAR1A-217ENST00000589228 LCE1FQ5T754 118 aa2.58□□□□□ -2
PRKAR1A-217ENST00000589228 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
PRKAR1A-217ENST00000589228 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
PRKAR1A-217ENST00000589228 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
PRKAR1A-217ENST00000589228 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
PRKAR1A-217ENST00000589228 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
PRKAR1A-217ENST00000589228 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
PRKAR1A-217ENST00000589228 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.05
PRKAR1A-217ENST00000589228 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
PRKAR1A-217ENST00000589228 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
PRKAR1A-217ENST00000589228 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
PRKAR1A-217ENST00000589228 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
PRKAR1A-217ENST00000589228 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
PRKAR1A-217ENST00000589228 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
PRKAR1A-217ENST00000589228 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
PRKAR1A-217ENST00000589228 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
PRKAR1A-217ENST00000589228 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
PRKAR1A-217ENST00000589228 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
PRKAR1A-217ENST00000589228 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
PRKAR1A-217ENST00000589228 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
PRKAR1A-217ENST00000589228 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms