RNA–Protein interactions for RNA: ENST00000588861.1

HDHD2-206, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

Gene HDHD2, Length 3,229 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-206ENST00000588861 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
HDHD2-206ENST00000588861 KRTAP4-7Q9BYR0 210 aa3.22□□□□□ -1.89
HDHD2-206ENST00000588861 KRTAP9-8Q9BYQ0 159 aa3.2□□□□□ -1.9
HDHD2-206ENST00000588861 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
HDHD2-206ENST00000588861 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
HDHD2-206ENST00000588861 KMT2DO14686 5537 aa3.17□□□□□ -1.9
HDHD2-206ENST00000588861 KRTAP19-6Q3LI70 58 aa3.16□□□□□ -1.9
HDHD2-206ENST00000588861 KRTAP9-3Q9BYQ3 159 aa3.14□□□□□ -1.91
HDHD2-206ENST00000588861 CRCT1Q9UGL9 99 aa3.1□□□□□ -1.91
HDHD2-206ENST00000588861 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
HDHD2-206ENST00000588861 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
HDHD2-206ENST00000588861 LCE1DQ5T752 114 aa3.06□□□□□ -1.92
HDHD2-206ENST00000588861 USH2AO75445 5202 aa3.01□□□□□ -1.93
HDHD2-206ENST00000588861 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
HDHD2-206ENST00000588861 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
HDHD2-206ENST00000588861 FSIP2Q5CZC0 6907 aa3□□□□□ -1.93
HDHD2-206ENST00000588861 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
HDHD2-206ENST00000588861 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
HDHD2-206ENST00000588861 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
HDHD2-206ENST00000588861 MT1LQ93083 61 aa2.97□□□□□ -1.93
HDHD2-206ENST00000588861 KRTAP4-9Q9BYQ8 210 aa2.97□□□□□ -1.93
HDHD2-206ENST00000588861 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
HDHD2-206ENST00000588861 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
HDHD2-206ENST00000588861 MT3P25713 68 aa2.93□□□□□ -1.94
HDHD2-206ENST00000588861 MT1GP13640 62 aa2.91□□□□□ -1.94
HDHD2-206ENST00000588861 MT1EP04732 61 aa2.89□□□□□ -1.95
HDHD2-206ENST00000588861 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
HDHD2-206ENST00000588861 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
HDHD2-206ENST00000588861 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
HDHD2-206ENST00000588861 PRM1P04553 51 aa2.88□□□□□ -1.95
HDHD2-206ENST00000588861 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
HDHD2-206ENST00000588861 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
HDHD2-206ENST00000588861 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
HDHD2-206ENST00000588861 FCGBPQ9Y6R7 5405 aaPredicted RBP2.75□□□□□ -1.97
HDHD2-206ENST00000588861 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
HDHD2-206ENST00000588861 DSTQ03001 7570 aaKnown RBP2.72□□□□□ -1.97
HDHD2-206ENST00000588861 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
HDHD2-206ENST00000588861 MT1MQ8N339 61 aa2.69□□□□□ -1.98
HDHD2-206ENST00000588861 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
HDHD2-206ENST00000588861 MT1AP04731 61 aa2.67□□□□□ -1.98
HDHD2-206ENST00000588861 MUC12Q9UKN1 5478 aa2.63□□□□□ -1.99
HDHD2-206ENST00000588861 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
HDHD2-206ENST00000588861 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
HDHD2-206ENST00000588861 NEBP20929 6669 aa2.59□□□□□ -1.99
HDHD2-206ENST00000588861 HMCN1Q96RW7 5635 aa2.59□□□□□ -1.99
HDHD2-206ENST00000588861 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
HDHD2-206ENST00000588861 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
HDHD2-206ENST00000588861 SPRR2FQ96RM1 72 aa2.46□□□□□ -2.02
HDHD2-206ENST00000588861 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
HDHD2-206ENST00000588861 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
HDHD2-206ENST00000588861 SYNE2Q8WXH0 6885 aaKnown RBP2.44□□□□□ -2.02
HDHD2-206ENST00000588861 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
HDHD2-206ENST00000588861 SPRR2EP22531 72 aa2.37□□□□□ -2.03
HDHD2-206ENST00000588861 SPRR2BP35325 72 aa2.37□□□□□ -2.03
HDHD2-206ENST00000588861 SPRR2AP35326 72 aa2.37□□□□□ -2.03
HDHD2-206ENST00000588861 SPRR2DP22532 72 aa2.33□□□□□ -2.04
HDHD2-206ENST00000588861 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
HDHD2-206ENST00000588861 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
HDHD2-206ENST00000588861 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
HDHD2-206ENST00000588861 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
HDHD2-206ENST00000588861 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
HDHD2-206ENST00000588861 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
HDHD2-206ENST00000588861 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
HDHD2-206ENST00000588861 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
HDHD2-206ENST00000588861 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
HDHD2-206ENST00000588861 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
HDHD2-206ENST00000588861 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
HDHD2-206ENST00000588861 MT4P47944 62 aa1.96□□□□□ -2.09
HDHD2-206ENST00000588861 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
HDHD2-206ENST00000588861 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
HDHD2-206ENST00000588861 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
HDHD2-206ENST00000588861 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
HDHD2-206ENST00000588861 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
HDHD2-206ENST00000588861 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
HDHD2-206ENST00000588861 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
HDHD2-206ENST00000588861 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
HDHD2-206ENST00000588861 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
HDHD2-206ENST00000588861 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms