RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
ZNF554-202ENST00000588534 SPRR2DP22532 72 aa2.61□□□□□ -1.99
ZNF554-202ENST00000588534 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
ZNF554-202ENST00000588534 MT1LQ93083 61 aa2.6□□□□□ -1.99
ZNF554-202ENST00000588534 KRTAP9-4Q9BYQ2 154 aa2.6□□□□□ -1.99
ZNF554-202ENST00000588534 USH2AO75445 5202 aa2.57□□□□□ -2
ZNF554-202ENST00000588534 KRTAP19-7Q3SYF9 63 aa2.56□□□□□ -2
ZNF554-202ENST00000588534 LCE1FQ5T754 118 aa2.56□□□□□ -2
ZNF554-202ENST00000588534 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.56□□□□□ -2
ZNF554-202ENST00000588534 FSIP2Q5CZC0 6907 aa2.56□□□□□ -2
ZNF554-202ENST00000588534 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
ZNF554-202ENST00000588534 LCE4AQ5TA78 99 aa2.54□□□□□ -2
ZNF554-202ENST00000588534 KRTAP9-7A8MTY7 169 aa2.52□□□□□ -2.01
ZNF554-202ENST00000588534 MT1MQ8N339 61 aa2.51□□□□□ -2.01
ZNF554-202ENST00000588534 KRTAP2-3P0C7H8 128 aa2.48□□□□□ -2.01
ZNF554-202ENST00000588534 KRTAP2-4Q9BYR9 128 aa2.48□□□□□ -2.01
ZNF554-202ENST00000588534 KRTAP2-1Q9BYU5 128 aa2.48□□□□□ -2.01
ZNF554-202ENST00000588534 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
ZNF554-202ENST00000588534 KRTAP5-9P26371 169 aa2.47□□□□□ -2.01
ZNF554-202ENST00000588534 KRTAP2-2Q9BYT5 123 aa2.46□□□□□ -2.02
ZNF554-202ENST00000588534 KRTAP12-4P60329 112 aa2.45□□□□□ -2.02
ZNF554-202ENST00000588534 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
ZNF554-202ENST00000588534 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
ZNF554-202ENST00000588534 LCE3BQ5TA77 95 aa2.42□□□□□ -2.02
ZNF554-202ENST00000588534 FCGBPQ9Y6R7 5405 aaPredicted RBP2.41□□□□□ -2.02
ZNF554-202ENST00000588534 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
ZNF554-202ENST00000588534 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.02
ZNF554-202ENST00000588534 KRTAP4-7Q9BYR0 210 aa2.39□□□□□ -2.03
ZNF554-202ENST00000588534 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
ZNF554-202ENST00000588534 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
ZNF554-202ENST00000588534 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
ZNF554-202ENST00000588534 MT3P25713 68 aa2.35□□□□□ -2.03
ZNF554-202ENST00000588534 MACF1Q9UPN3 7388 aaKnown RBP2.32□□□□□ -2.04
ZNF554-202ENST00000588534 KRTAP4-3Q9BYR4 195 aa2.31□□□□□ -2.04
ZNF554-202ENST00000588534 MT1AP04731 61 aa2.3□□□□□ -2.04
ZNF554-202ENST00000588534 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
ZNF554-202ENST00000588534 LCE1DQ5T752 114 aa2.28□□□□□ -2.04
ZNF554-202ENST00000588534 LOC100996750A0A140TA64 210 aa2.24□□□□□ -2.05
ZNF554-202ENST00000588534 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
ZNF554-202ENST00000588534 NEBP20929 6669 aa2.23□□□□□ -2.05
ZNF554-202ENST00000588534 KMT2DO14686 5537 aa2.21□□□□□ -2.05
ZNF554-202ENST00000588534 MT4P47944 62 aa2.21□□□□□ -2.06
ZNF554-202ENST00000588534 KRTAP6-1Q3LI64 71 aa2.13□□□□□ -2.07
ZNF554-202ENST00000588534 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
ZNF554-202ENST00000588534 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
ZNF554-202ENST00000588534 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
ZNF554-202ENST00000588534 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
ZNF554-202ENST00000588534 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
ZNF554-202ENST00000588534 KRTAP4-9Q9BYQ8 210 aa2.05□□□□□ -2.08
ZNF554-202ENST00000588534 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
ZNF554-202ENST00000588534 KRTAP6-2Q3LI66 62 aa2.04□□□□□ -2.08
ZNF554-202ENST00000588534 KRTAP4-6Q9BYQ5 205 aa2□□□□□ -2.09
ZNF554-202ENST00000588534 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
ZNF554-202ENST00000588534 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
ZNF554-202ENST00000588534 KRTAP4-12Q9BQ66 201 aa1.87□□□□□ -2.11
ZNF554-202ENST00000588534 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
ZNF554-202ENST00000588534 GPR98Q8WXG9 6306 aa1.83□□□□□ -2.12
ZNF554-202ENST00000588534 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
ZNF554-202ENST00000588534 KRTAP5-3Q6L8H2 238 aa1.8□□□□□ -2.12
ZNF554-202ENST00000588534 PRM1P04553 51 aa1.8□□□□□ -2.12
ZNF554-202ENST00000588534 KRTAP5-10Q6L8G5 202 aa1.79□□□□□ -2.12
ZNF554-202ENST00000588534 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.13
ZNF554-202ENST00000588534 KRTAP4-11Q9BYQ6 195 aa1.77□□□□□ -2.13
ZNF554-202ENST00000588534 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
ZNF554-202ENST00000588534 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
ZNF554-202ENST00000588534 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
ZNF554-202ENST00000588534 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
ZNF554-202ENST00000588534 KRTAP4-2Q9BYR5 136 aa1.61□□□□□ -2.15
ZNF554-202ENST00000588534 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
ZNF554-202ENST00000588534 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
ZNF554-202ENST00000588534 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
ZNF554-202ENST00000588534 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.46□□□□□ -2.18
ZNF554-202ENST00000588534 KRTAP5-11Q6L8G4 156 aa1.41□□□□□ -2.18
ZNF554-202ENST00000588534 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
ZNF554-202ENST00000588534 KRTAP4-4Q9BYR3 166 aa1.3□□□□□ -2.2
ZNF554-202ENST00000588534 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
ZNF554-202ENST00000588534 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
ZNF554-202ENST00000588534 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 97.2 ms