RNA–Protein interactions for RNA: ENST00000587175.1

CACTIN-205, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 5

Gene CACTIN, Length 2,216 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-205ENST00000587175 KRTAP2-3P0C7H8 128 aa7.03□□□□□ -1.28
CACTIN-205ENST00000587175 KRTAP2-4Q9BYR9 128 aa7.03□□□□□ -1.28
CACTIN-205ENST00000587175 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
CACTIN-205ENST00000587175 KRTAP19-3Q7Z4W3 81 aa6.91□□□□□ -1.3
CACTIN-205ENST00000587175 MUC12Q9UKN1 5478 aa6.88□□□□□ -1.31
CACTIN-205ENST00000587175 MT1GP13640 62 aa6.88□□□□□ -1.31
CACTIN-205ENST00000587175 MT1MQ8N339 61 aa6.85□□□□□ -1.31
CACTIN-205ENST00000587175 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
CACTIN-205ENST00000587175 SPRR2FQ96RM1 72 aa6.81□□□□□ -1.32
CACTIN-205ENST00000587175 KRTAP9-2Q9BYQ4 174 aa6.75□□□□□ -1.33
CACTIN-205ENST00000587175 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
CACTIN-205ENST00000587175 MACF1Q9UPN3 7388 aaKnown RBP6.7□□□□□ -1.34
CACTIN-205ENST00000587175 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
CACTIN-205ENST00000587175 CRCT1Q9UGL9 99 aa6.58□□□□□ -1.36
CACTIN-205ENST00000587175 DSTQ03001 7570 aaKnown RBP6.48□□□□□ -1.37
CACTIN-205ENST00000587175 SYNE2Q8WXH0 6885 aaKnown RBP6.44□□□□□ -1.38
CACTIN-205ENST00000587175 KRTAP5-9P26371 169 aa6.44□□□□□ -1.38
CACTIN-205ENST00000587175 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
CACTIN-205ENST00000587175 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
CACTIN-205ENST00000587175 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
CACTIN-205ENST00000587175 SPRR2EP22531 72 aa6.29□□□□□ -1.4
CACTIN-205ENST00000587175 SPRR2BP35325 72 aa6.29□□□□□ -1.4
CACTIN-205ENST00000587175 SPRR2AP35326 72 aa6.29□□□□□ -1.4
CACTIN-205ENST00000587175 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
CACTIN-205ENST00000587175 LCE3BQ5TA77 95 aa6.15□□□□□ -1.43
CACTIN-205ENST00000587175 MT1AP04731 61 aa6.13□□□□□ -1.43
CACTIN-205ENST00000587175 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
CACTIN-205ENST00000587175 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
CACTIN-205ENST00000587175 KRTAP6-3Q3LI67 103 aa6.05□□□□□ -1.44
CACTIN-205ENST00000587175 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
CACTIN-205ENST00000587175 SPRR2DP22532 72 aa6.04□□□□□ -1.44
CACTIN-205ENST00000587175 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
CACTIN-205ENST00000587175 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
CACTIN-205ENST00000587175 LCE3DQ9BYE3 92 aa5.8□□□□□ -1.48
CACTIN-205ENST00000587175 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
CACTIN-205ENST00000587175 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
CACTIN-205ENST00000587175 LCE3EQ5T5B0 92 aa5.74□□□□□ -1.49
CACTIN-205ENST00000587175 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
CACTIN-205ENST00000587175 MT3P25713 68 aa5.54□□□□□ -1.52
CACTIN-205ENST00000587175 NEBP20929 6669 aa5.54□□□□□ -1.52
CACTIN-205ENST00000587175 PRM1P04553 51 aa5.5□□□□□ -1.53
CACTIN-205ENST00000587175 KRTAP5-4Q6L8H1 288 aa5.5□□□□□ -1.53
CACTIN-205ENST00000587175 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
CACTIN-205ENST00000587175 MT4P47944 62 aa5.28□□□□□ -1.56
CACTIN-205ENST00000587175 KRTAP4-6Q9BYQ5 205 aa5.27□□□□□ -1.57
CACTIN-205ENST00000587175 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
CACTIN-205ENST00000587175 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
CACTIN-205ENST00000587175 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
CACTIN-205ENST00000587175 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
CACTIN-205ENST00000587175 KRTAP5-2Q701N4 177 aa5.09□□□□□ -1.59
CACTIN-205ENST00000587175 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
CACTIN-205ENST00000587175 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
CACTIN-205ENST00000587175 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
CACTIN-205ENST00000587175 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
CACTIN-205ENST00000587175 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
CACTIN-205ENST00000587175 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
CACTIN-205ENST00000587175 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
CACTIN-205ENST00000587175 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
CACTIN-205ENST00000587175 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
CACTIN-205ENST00000587175 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.72
CACTIN-205ENST00000587175 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
CACTIN-205ENST00000587175 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
CACTIN-205ENST00000587175 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
CACTIN-205ENST00000587175 KRTAP5-8O75690 187 aa4.15□□□□□ -1.75
CACTIN-205ENST00000587175 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
CACTIN-205ENST00000587175 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
CACTIN-205ENST00000587175 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
CACTIN-205ENST00000587175 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
CACTIN-205ENST00000587175 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
CACTIN-205ENST00000587175 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
CACTIN-205ENST00000587175 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
CACTIN-205ENST00000587175 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.84
CACTIN-205ENST00000587175 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
CACTIN-205ENST00000587175 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
CACTIN-205ENST00000587175 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
CACTIN-205ENST00000587175 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
CACTIN-205ENST00000587175 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
CACTIN-205ENST00000587175 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 64.8 ms