RNA–Protein interactions for RNA: ENST00000586539.5

ABCA8-208, Transcript of ATP binding cassette subfamily A member 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCA8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-208ENST00000586539 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
ABCA8-208ENST00000586539 MT1LQ93083 61 aa3.62□□□□□ -1.83
ABCA8-208ENST00000586539 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
ABCA8-208ENST00000586539 KRTAP19-6Q3LI70 58 aa3.59□□□□□ -1.83
ABCA8-208ENST00000586539 MT1EP04732 61 aa3.58□□□□□ -1.84
ABCA8-208ENST00000586539 LCE2DQ5TA82 110 aaPredicted RBP3.54□□□□□ -1.84
ABCA8-208ENST00000586539 MT1MQ8N339 61 aa3.47□□□□□ -1.85
ABCA8-208ENST00000586539 KRTAP4-7Q9BYR0 210 aa3.47□□□□□ -1.85
ABCA8-208ENST00000586539 KRTAP9-2Q9BYQ4 174 aa3.47□□□□□ -1.85
ABCA8-208ENST00000586539 LCE2AQ5TA79 106 aaPredicted RBP3.44□□□□□ -1.86
ABCA8-208ENST00000586539 USH2AO75445 5202 aa3.38□□□□□ -1.87
ABCA8-208ENST00000586539 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
ABCA8-208ENST00000586539 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
ABCA8-208ENST00000586539 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
ABCA8-208ENST00000586539 KRTAP9-6A0A140TA67 174 aa3.33□□□□□ -1.88
ABCA8-208ENST00000586539 KMT2DO14686 5537 aa3.3□□□□□ -1.88
ABCA8-208ENST00000586539 MT4P47944 62 aa3.29□□□□□ -1.88
ABCA8-208ENST00000586539 MT1AP04731 61 aa3.28□□□□□ -1.88
ABCA8-208ENST00000586539 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
ABCA8-208ENST00000586539 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
ABCA8-208ENST00000586539 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
ABCA8-208ENST00000586539 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
ABCA8-208ENST00000586539 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
ABCA8-208ENST00000586539 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
ABCA8-208ENST00000586539 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
ABCA8-208ENST00000586539 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
ABCA8-208ENST00000586539 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
ABCA8-208ENST00000586539 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
ABCA8-208ENST00000586539 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
ABCA8-208ENST00000586539 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
ABCA8-208ENST00000586539 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
ABCA8-208ENST00000586539 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
ABCA8-208ENST00000586539 LCE4AQ5TA78 99 aa3.09□□□□□ -1.91
ABCA8-208ENST00000586539 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.92
ABCA8-208ENST00000586539 LCE5AQ5TCM9 118 aa3.05□□□□□ -1.92
ABCA8-208ENST00000586539 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
ABCA8-208ENST00000586539 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
ABCA8-208ENST00000586539 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
ABCA8-208ENST00000586539 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.92
ABCA8-208ENST00000586539 KRTAP9-4Q9BYQ2 154 aa3□□□□□ -1.93
ABCA8-208ENST00000586539 KRTAP4-9Q9BYQ8 210 aa3□□□□□ -1.93
ABCA8-208ENST00000586539 MACF1Q9UPN3 7388 aaKnown RBP2.97□□□□□ -1.93
ABCA8-208ENST00000586539 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
ABCA8-208ENST00000586539 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
ABCA8-208ENST00000586539 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
ABCA8-208ENST00000586539 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
ABCA8-208ENST00000586539 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
ABCA8-208ENST00000586539 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
ABCA8-208ENST00000586539 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
ABCA8-208ENST00000586539 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
ABCA8-208ENST00000586539 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
ABCA8-208ENST00000586539 NEBP20929 6669 aa2.57□□□□□ -2
ABCA8-208ENST00000586539 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
ABCA8-208ENST00000586539 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
ABCA8-208ENST00000586539 KRTAP4-6Q9BYQ5 205 aa2.47□□□□□ -2.01
ABCA8-208ENST00000586539 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
ABCA8-208ENST00000586539 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.04
ABCA8-208ENST00000586539 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
ABCA8-208ENST00000586539 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
ABCA8-208ENST00000586539 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
ABCA8-208ENST00000586539 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.07
ABCA8-208ENST00000586539 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.07
ABCA8-208ENST00000586539 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
ABCA8-208ENST00000586539 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
ABCA8-208ENST00000586539 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
ABCA8-208ENST00000586539 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
ABCA8-208ENST00000586539 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
ABCA8-208ENST00000586539 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
ABCA8-208ENST00000586539 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
ABCA8-208ENST00000586539 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
ABCA8-208ENST00000586539 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
ABCA8-208ENST00000586539 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.14
ABCA8-208ENST00000586539 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
ABCA8-208ENST00000586539 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
ABCA8-208ENST00000586539 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.55□□□□□ -2.16
ABCA8-208ENST00000586539 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
ABCA8-208ENST00000586539 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 240 ms