RNA–Protein interactions for RNA: ENST00000585839.5

PKN1-204, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 3,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-204ENST00000585839 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
PKN1-204ENST00000585839 INE1O15225 51 aa6.38□□□□□ -1.39
PKN1-204ENST00000585839 MT1LQ93083 61 aa6.36□□□□□ -1.39
PKN1-204ENST00000585839 MT1EP04732 61 aa6.34□□□□□ -1.39
PKN1-204ENST00000585839 MT1GP13640 62 aa6.34□□□□□ -1.39
PKN1-204ENST00000585839 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
PKN1-204ENST00000585839 SPRR2FQ96RM1 72 aa6.2□□□□□ -1.42
PKN1-204ENST00000585839 MACF1Q9UPN3 7388 aaKnown RBP6.17□□□□□ -1.42
PKN1-204ENST00000585839 LCE2DQ5TA82 110 aaPredicted RBP6.08□□□□□ -1.44
PKN1-204ENST00000585839 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
PKN1-204ENST00000585839 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
PKN1-204ENST00000585839 MT1MQ8N339 61 aa5.98□□□□□ -1.45
PKN1-204ENST00000585839 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
PKN1-204ENST00000585839 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
PKN1-204ENST00000585839 KRTAP2-1Q9BYU5 128 aa5.97□□□□□ -1.45
PKN1-204ENST00000585839 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
PKN1-204ENST00000585839 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.46
PKN1-204ENST00000585839 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
PKN1-204ENST00000585839 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
PKN1-204ENST00000585839 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
PKN1-204ENST00000585839 SPRR2EP22531 72 aa5.57□□□□□ -1.52
PKN1-204ENST00000585839 SPRR2BP35325 72 aa5.57□□□□□ -1.52
PKN1-204ENST00000585839 SPRR2AP35326 72 aa5.57□□□□□ -1.52
PKN1-204ENST00000585839 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
PKN1-204ENST00000585839 KRTAP9-2Q9BYQ4 174 aa5.56□□□□□ -1.52
PKN1-204ENST00000585839 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
PKN1-204ENST00000585839 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
PKN1-204ENST00000585839 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
PKN1-204ENST00000585839 SPRR2DP22532 72 aa5.28□□□□□ -1.56
PKN1-204ENST00000585839 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
PKN1-204ENST00000585839 MT1AP04731 61 aa5.23□□□□□ -1.57
PKN1-204ENST00000585839 LCE3EQ5T5B0 92 aa5.21□□□□□ -1.58
PKN1-204ENST00000585839 PRM1P04553 51 aa5.16□□□□□ -1.58
PKN1-204ENST00000585839 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
PKN1-204ENST00000585839 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
PKN1-204ENST00000585839 MT4P47944 62 aa4.97□□□□□ -1.61
PKN1-204ENST00000585839 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
PKN1-204ENST00000585839 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
PKN1-204ENST00000585839 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
PKN1-204ENST00000585839 MT3P25713 68 aa4.83□□□□□ -1.64
PKN1-204ENST00000585839 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
PKN1-204ENST00000585839 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.66
PKN1-204ENST00000585839 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
PKN1-204ENST00000585839 NEBP20929 6669 aa4.66□□□□□ -1.66
PKN1-204ENST00000585839 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
PKN1-204ENST00000585839 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
PKN1-204ENST00000585839 LCE1BQ5T7P3 118 aa4.45□□□□□ -1.7
PKN1-204ENST00000585839 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
PKN1-204ENST00000585839 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
PKN1-204ENST00000585839 MUC19Q7Z5P9 8384 aa4.26□□□□□ -1.73
PKN1-204ENST00000585839 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
PKN1-204ENST00000585839 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
PKN1-204ENST00000585839 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
PKN1-204ENST00000585839 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
PKN1-204ENST00000585839 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
PKN1-204ENST00000585839 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
PKN1-204ENST00000585839 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
PKN1-204ENST00000585839 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
PKN1-204ENST00000585839 LCE1EQ5T753 118 aa3.71□□□□□ -1.81
PKN1-204ENST00000585839 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
PKN1-204ENST00000585839 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
PKN1-204ENST00000585839 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
PKN1-204ENST00000585839 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
PKN1-204ENST00000585839 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
PKN1-204ENST00000585839 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
PKN1-204ENST00000585839 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
PKN1-204ENST00000585839 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
PKN1-204ENST00000585839 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
PKN1-204ENST00000585839 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
PKN1-204ENST00000585839 LCE1FQ5T754 118 aa3.15□□□□□ -1.9
PKN1-204ENST00000585839 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
PKN1-204ENST00000585839 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
PKN1-204ENST00000585839 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
PKN1-204ENST00000585839 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
PKN1-204ENST00000585839 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
PKN1-204ENST00000585839 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
PKN1-204ENST00000585839 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
PKN1-204ENST00000585839 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 51.3 ms