RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
CUEDC1-212ENST00000584746 MT1LQ93083 61 aa6.2□□□□□ -1.42
CUEDC1-212ENST00000584746 MT1EP04732 61 aa6.19□□□□□ -1.42
CUEDC1-212ENST00000584746 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
CUEDC1-212ENST00000584746 SYNE2Q8WXH0 6885 aaKnown RBP6.1□□□□□ -1.43
CUEDC1-212ENST00000584746 MACF1Q9UPN3 7388 aaKnown RBP6.09□□□□□ -1.43
CUEDC1-212ENST00000584746 MT1GP13640 62 aa6.06□□□□□ -1.44
CUEDC1-212ENST00000584746 OBSCNQ5VST9 7968 aa6.01□□□□□ -1.45
CUEDC1-212ENST00000584746 MDN1Q9NU22 5596 aa5.99□□□□□ -1.45
CUEDC1-212ENST00000584746 KRTAP2-3P0C7H8 128 aa5.94□□□□□ -1.46
CUEDC1-212ENST00000584746 KRTAP2-4Q9BYR9 128 aa5.94□□□□□ -1.46
CUEDC1-212ENST00000584746 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
CUEDC1-212ENST00000584746 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
CUEDC1-212ENST00000584746 SPRR2FQ96RM1 72 aa5.81□□□□□ -1.48
CUEDC1-212ENST00000584746 MT1MQ8N339 61 aa5.8□□□□□ -1.48
CUEDC1-212ENST00000584746 KRTAP19-3Q7Z4W3 81 aa5.76□□□□□ -1.49
CUEDC1-212ENST00000584746 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
CUEDC1-212ENST00000584746 LCE3BQ5TA77 95 aa5.65□□□□□ -1.5
CUEDC1-212ENST00000584746 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.51
CUEDC1-212ENST00000584746 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
CUEDC1-212ENST00000584746 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
CUEDC1-212ENST00000584746 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
CUEDC1-212ENST00000584746 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.55
CUEDC1-212ENST00000584746 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
CUEDC1-212ENST00000584746 SPRR2EP22531 72 aa5.21□□□□□ -1.58
CUEDC1-212ENST00000584746 SPRR2BP35325 72 aa5.21□□□□□ -1.58
CUEDC1-212ENST00000584746 SPRR2AP35326 72 aa5.21□□□□□ -1.58
CUEDC1-212ENST00000584746 KRTAP9-6A0A140TA67 174 aa5.14□□□□□ -1.59
CUEDC1-212ENST00000584746 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
CUEDC1-212ENST00000584746 LCE3DQ9BYE3 92 aa5.09□□□□□ -1.6
CUEDC1-212ENST00000584746 MT1AP04731 61 aa5.07□□□□□ -1.6
CUEDC1-212ENST00000584746 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
CUEDC1-212ENST00000584746 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
CUEDC1-212ENST00000584746 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
CUEDC1-212ENST00000584746 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.62
CUEDC1-212ENST00000584746 SPRR2DP22532 72 aa4.94□□□□□ -1.62
CUEDC1-212ENST00000584746 PRM1P04553 51 aa4.94□□□□□ -1.62
CUEDC1-212ENST00000584746 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
CUEDC1-212ENST00000584746 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
CUEDC1-212ENST00000584746 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
CUEDC1-212ENST00000584746 MT4P47944 62 aa4.62□□□□□ -1.67
CUEDC1-212ENST00000584746 NEBP20929 6669 aa4.61□□□□□ -1.67
CUEDC1-212ENST00000584746 MT3P25713 68 aa4.59□□□□□ -1.68
CUEDC1-212ENST00000584746 KRTAP4-6Q9BYQ5 205 aa4.57□□□□□ -1.68
CUEDC1-212ENST00000584746 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
CUEDC1-212ENST00000584746 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
CUEDC1-212ENST00000584746 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.7
CUEDC1-212ENST00000584746 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
CUEDC1-212ENST00000584746 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
CUEDC1-212ENST00000584746 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
CUEDC1-212ENST00000584746 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
CUEDC1-212ENST00000584746 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
CUEDC1-212ENST00000584746 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
CUEDC1-212ENST00000584746 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
CUEDC1-212ENST00000584746 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
CUEDC1-212ENST00000584746 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
CUEDC1-212ENST00000584746 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
CUEDC1-212ENST00000584746 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
CUEDC1-212ENST00000584746 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
CUEDC1-212ENST00000584746 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
CUEDC1-212ENST00000584746 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
CUEDC1-212ENST00000584746 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
CUEDC1-212ENST00000584746 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
CUEDC1-212ENST00000584746 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
CUEDC1-212ENST00000584746 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
CUEDC1-212ENST00000584746 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
CUEDC1-212ENST00000584746 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
CUEDC1-212ENST00000584746 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
CUEDC1-212ENST00000584746 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
CUEDC1-212ENST00000584746 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
CUEDC1-212ENST00000584746 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
CUEDC1-212ENST00000584746 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
CUEDC1-212ENST00000584746 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
CUEDC1-212ENST00000584746 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
CUEDC1-212ENST00000584746 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.94
CUEDC1-212ENST00000584746 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
CUEDC1-212ENST00000584746 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
CUEDC1-212ENST00000584746 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 40.4 ms