RNA–Protein interactions for RNA: ENST00000584601.5

ERBB2-219, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-219ENST00000584601 LCE2AQ5TA79 106 aaPredicted RBP4□□□□□ -1.77
ERBB2-219ENST00000584601 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
ERBB2-219ENST00000584601 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
ERBB2-219ENST00000584601 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.78
ERBB2-219ENST00000584601 MT1MQ8N339 61 aa3.86□□□□□ -1.79
ERBB2-219ENST00000584601 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
ERBB2-219ENST00000584601 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
ERBB2-219ENST00000584601 LCE2DQ5TA82 110 aaPredicted RBP3.81□□□□□ -1.8
ERBB2-219ENST00000584601 KRTAP9-2Q9BYQ4 174 aa3.79□□□□□ -1.8
ERBB2-219ENST00000584601 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
ERBB2-219ENST00000584601 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
ERBB2-219ENST00000584601 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
ERBB2-219ENST00000584601 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.8
ERBB2-219ENST00000584601 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
ERBB2-219ENST00000584601 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.81
ERBB2-219ENST00000584601 PRM1P04553 51 aa3.64□□□□□ -1.83
ERBB2-219ENST00000584601 USH2AO75445 5202 aa3.63□□□□□ -1.83
ERBB2-219ENST00000584601 MT3P25713 68 aa3.61□□□□□ -1.83
ERBB2-219ENST00000584601 MT1AP04731 61 aa3.56□□□□□ -1.84
ERBB2-219ENST00000584601 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
ERBB2-219ENST00000584601 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
ERBB2-219ENST00000584601 MT4P47944 62 aa3.53□□□□□ -1.84
ERBB2-219ENST00000584601 KRTAP9-6A0A140TA67 174 aa3.51□□□□□ -1.85
ERBB2-219ENST00000584601 KMT2DO14686 5537 aa3.5□□□□□ -1.85
ERBB2-219ENST00000584601 FCGBPQ9Y6R7 5405 aaPredicted RBP3.49□□□□□ -1.85
ERBB2-219ENST00000584601 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
ERBB2-219ENST00000584601 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
ERBB2-219ENST00000584601 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
ERBB2-219ENST00000584601 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
ERBB2-219ENST00000584601 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
ERBB2-219ENST00000584601 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
ERBB2-219ENST00000584601 KRTAP9-7A8MTY7 169 aa3.32□□□□□ -1.88
ERBB2-219ENST00000584601 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.32□□□□□ -1.88
ERBB2-219ENST00000584601 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
ERBB2-219ENST00000584601 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
ERBB2-219ENST00000584601 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
ERBB2-219ENST00000584601 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
ERBB2-219ENST00000584601 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
ERBB2-219ENST00000584601 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
ERBB2-219ENST00000584601 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
ERBB2-219ENST00000584601 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
ERBB2-219ENST00000584601 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
ERBB2-219ENST00000584601 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
ERBB2-219ENST00000584601 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
ERBB2-219ENST00000584601 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
ERBB2-219ENST00000584601 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
ERBB2-219ENST00000584601 MDN1Q9NU22 5596 aa2.9□□□□□ -1.95
ERBB2-219ENST00000584601 NEBP20929 6669 aa2.88□□□□□ -1.95
ERBB2-219ENST00000584601 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.96
ERBB2-219ENST00000584601 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
ERBB2-219ENST00000584601 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
ERBB2-219ENST00000584601 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
ERBB2-219ENST00000584601 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
ERBB2-219ENST00000584601 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
ERBB2-219ENST00000584601 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
ERBB2-219ENST00000584601 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
ERBB2-219ENST00000584601 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
ERBB2-219ENST00000584601 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
ERBB2-219ENST00000584601 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
ERBB2-219ENST00000584601 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
ERBB2-219ENST00000584601 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
ERBB2-219ENST00000584601 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
ERBB2-219ENST00000584601 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
ERBB2-219ENST00000584601 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
ERBB2-219ENST00000584601 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
ERBB2-219ENST00000584601 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.07
ERBB2-219ENST00000584601 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
ERBB2-219ENST00000584601 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
ERBB2-219ENST00000584601 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
ERBB2-219ENST00000584601 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.1
ERBB2-219ENST00000584601 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
ERBB2-219ENST00000584601 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
ERBB2-219ENST00000584601 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
ERBB2-219ENST00000584601 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
ERBB2-219ENST00000584601 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
ERBB2-219ENST00000584601 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
ERBB2-219ENST00000584601 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 59.1 ms