RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 MT1EP04732 61 aa3.09□□□□□ -1.91
SKA2-207ENST00000583380 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
SKA2-207ENST00000583380 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
SKA2-207ENST00000583380 MT1HP80294 61 aa3.05□□□□□ -1.92
SKA2-207ENST00000583380 MT1LQ93083 61 aa3.05□□□□□ -1.92
SKA2-207ENST00000583380 RYR3Q15413 4870 aa3.04□□□□□ -1.92
SKA2-207ENST00000583380 MT1AP04731 61 aa3.02□□□□□ -1.93
SKA2-207ENST00000583380 HMCN2Q8NDA2 5059 aa2.98□□□□□ -1.93
SKA2-207ENST00000583380 HERC2O95714 4834 aa2.97□□□□□ -1.93
SKA2-207ENST00000583380 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
SKA2-207ENST00000583380 KRTAP19-7Q3SYF9 63 aa2.93□□□□□ -1.94
SKA2-207ENST00000583380 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
SKA2-207ENST00000583380 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.95
SKA2-207ENST00000583380 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
SKA2-207ENST00000583380 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
SKA2-207ENST00000583380 KIAA1109Q2LD37 5005 aa2.83□□□□□ -1.96
SKA2-207ENST00000583380 ABCA13Q86UQ4 5058 aa2.82□□□□□ -1.96
SKA2-207ENST00000583380 PRM1P04553 51 aa2.81□□□□□ -1.96
SKA2-207ENST00000583380 MUC2Q02817 5179 aa2.79□□□□□ -1.96
SKA2-207ENST00000583380 MT1GP13640 62 aa2.77□□□□□ -1.97
SKA2-207ENST00000583380 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
SKA2-207ENST00000583380 PCLOQ9Y6V0 5065 aa2.73□□□□□ -1.97
SKA2-207ENST00000583380 UBR4Q5T4S7 5183 aa2.7□□□□□ -1.98
SKA2-207ENST00000583380 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
SKA2-207ENST00000583380 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
SKA2-207ENST00000583380 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
SKA2-207ENST00000583380 SPRR2FQ96RM1 72 aa2.69□□□□□ -1.98
SKA2-207ENST00000583380 SPRR2AP35326 72 aa2.66□□□□□ -1.98
SKA2-207ENST00000583380 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
SKA2-207ENST00000583380 MT1MQ8N339 61 aa2.64□□□□□ -1.99
SKA2-207ENST00000583380 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
SKA2-207ENST00000583380 EPPK1P58107 5090 aaKnown RBP2.62□□□□□ -1.99
SKA2-207ENST00000583380 MT3P25713 68 aa2.61□□□□□ -1.99
SKA2-207ENST00000583380 SPRR2BP35325 72 aa2.57□□□□□ -2
SKA2-207ENST00000583380 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
SKA2-207ENST00000583380 SPRR2EP22531 72 aa2.48□□□□□ -2.01
SKA2-207ENST00000583380 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
SKA2-207ENST00000583380 SPRR2DP22532 72 aa2.45□□□□□ -2.02
SKA2-207ENST00000583380 CRCT1Q9UGL9 99 aa2.44□□□□□ -2.02
SKA2-207ENST00000583380 FAT4Q6V0I7 4981 aa2.43□□□□□ -2.02
SKA2-207ENST00000583380 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
SKA2-207ENST00000583380 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
SKA2-207ENST00000583380 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
SKA2-207ENST00000583380 KRTAP19-6Q3LI70 58 aa2.39□□□□□ -2.03
SKA2-207ENST00000583380 RNF213Q63HN8 5207 aa2.36□□□□□ -2.03
SKA2-207ENST00000583380 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
SKA2-207ENST00000583380 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
SKA2-207ENST00000583380 KMT2DO14686 5537 aa2.24□□□□□ -2.05
SKA2-207ENST00000583380 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
SKA2-207ENST00000583380 USH2AO75445 5202 aa2.17□□□□□ -2.06
SKA2-207ENST00000583380 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
SKA2-207ENST00000583380 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
SKA2-207ENST00000583380 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
SKA2-207ENST00000583380 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
SKA2-207ENST00000583380 FCGBPQ9Y6R7 5405 aaPredicted RBP1.9□□□□□ -2.1
SKA2-207ENST00000583380 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
SKA2-207ENST00000583380 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
SKA2-207ENST00000583380 MUC12Q9UKN1 5478 aa1.87□□□□□ -2.11
SKA2-207ENST00000583380 DSTQ03001 7570 aaKnown RBP1.79□□□□□ -2.12
SKA2-207ENST00000583380 MDN1Q9NU22 5596 aa1.78□□□□□ -2.12
SKA2-207ENST00000583380 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
SKA2-207ENST00000583380 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
SKA2-207ENST00000583380 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.15
SKA2-207ENST00000583380 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
SKA2-207ENST00000583380 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
SKA2-207ENST00000583380 FSIP2Q5CZC0 6907 aa1.55□□□□□ -2.16
SKA2-207ENST00000583380 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
SKA2-207ENST00000583380 KRTAP20-1Q3LI63 56 aa1.49□□□□□ -2.17
SKA2-207ENST00000583380 MACF1Q9UPN3 7388 aaKnown RBP1.44□□□□□ -2.18
SKA2-207ENST00000583380 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
SKA2-207ENST00000583380 MT4P47944 62 aa1.37□□□□□ -2.19
SKA2-207ENST00000583380 NEBP20929 6669 aa1.25□□□□□ -2.21
SKA2-207ENST00000583380 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
SKA2-207ENST00000583380 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
SKA2-207ENST00000583380 AHNAK2Q8IVF2 5795 aa0.86□□□□□ -2.27
SKA2-207ENST00000583380 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
SKA2-207ENST00000583380 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 10 ms