RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 MT1BP07438 61 aa1.65□□□□□ -2.14
NF1-219ENST00000579081 LCE1BQ5T7P3 118 aa1.65□□□□□ -2.15
NF1-219ENST00000579081 MT4P47944 62 aa1.64□□□□□ -2.15
NF1-219ENST00000579081 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
NF1-219ENST00000579081 KRTAP17-1Q9BYP8 105 aa1.63□□□□□ -2.15
NF1-219ENST00000579081 LCE4AQ5TA78 99 aa1.62□□□□□ -2.15
NF1-219ENST00000579081 PKD1P98161 4303 aa1.61□□□□□ -2.15
NF1-219ENST00000579081 LCE1DQ5T752 114 aa1.61□□□□□ -2.15
NF1-219ENST00000579081 PRM1P04553 51 aa1.61□□□□□ -2.15
NF1-219ENST00000579081 OBSCNQ5VST9 7968 aa1.6□□□□□ -2.15
NF1-219ENST00000579081 MT1MQ8N339 61 aa1.59□□□□□ -2.15
NF1-219ENST00000579081 MDN1Q9NU22 5596 aa1.59□□□□□ -2.15
NF1-219ENST00000579081 KRTAP9-8Q9BYQ0 159 aa1.58□□□□□ -2.16
NF1-219ENST00000579081 LRP2P98164 4655 aa1.58□□□□□ -2.16
NF1-219ENST00000579081 KRTAP9-3Q9BYQ3 159 aa1.58□□□□□ -2.16
NF1-219ENST00000579081 LCE1AQ5T7P2 110 aa1.57□□□□□ -2.16
NF1-219ENST00000579081 LCE5AQ5TCM9 118 aa1.57□□□□□ -2.16
NF1-219ENST00000579081 KRTAP4-7Q9BYR0 210 aa1.57□□□□□ -2.16
NF1-219ENST00000579081 PKHD1L1Q86WI1 4243 aa1.55□□□□□ -2.16
NF1-219ENST00000579081 FCGBPQ9Y6R7 5405 aaPredicted RBP1.54□□□□□ -2.16
NF1-219ENST00000579081 KRTAP20-1Q3LI63 56 aa1.49□□□□□ -2.17
NF1-219ENST00000579081 LOC100996750A0A140TA64 210 aa1.49□□□□□ -2.17
NF1-219ENST00000579081 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
NF1-219ENST00000579081 LCE1EQ5T753 118 aa1.48□□□□□ -2.17
NF1-219ENST00000579081 LCE1FQ5T754 118 aa1.48□□□□□ -2.17
NF1-219ENST00000579081 KRTAP9-2Q9BYQ4 174 aa1.47□□□□□ -2.17
NF1-219ENST00000579081 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
NF1-219ENST00000579081 KRTAP4-3Q9BYR4 195 aa1.46□□□□□ -2.18
NF1-219ENST00000579081 MUC17Q685J3 4493 aa1.46□□□□□ -2.18
NF1-219ENST00000579081 KRTAP19-2Q3LHN2 52 aa1.45□□□□□ -2.18
NF1-219ENST00000579081 KRTAP9-6A0A140TA67 174 aa1.45□□□□□ -2.18
NF1-219ENST00000579081 KRTAP9-6A8MVA2 160 aa1.42□□□□□ -2.18
NF1-219ENST00000579081 KRTAP4-9Q9BYQ8 210 aa1.41□□□□□ -2.18
NF1-219ENST00000579081 LCE2AQ5TA79 106 aaPredicted RBP1.4□□□□□ -2.19
NF1-219ENST00000579081 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
NF1-219ENST00000579081 KRTAP9-7A8MTY7 169 aa1.37□□□□□ -2.19
NF1-219ENST00000579081 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
NF1-219ENST00000579081 KRTAP9-4Q9BYQ2 154 aa1.35□□□□□ -2.19
NF1-219ENST00000579081 KRTAP6-3Q3LI67 103 aa1.35□□□□□ -2.19
NF1-219ENST00000579081 KRTAP2-2Q9BYT5 123 aa1.34□□□□□ -2.2
NF1-219ENST00000579081 KRTAP19-7Q3SYF9 63 aa1.33□□□□□ -2.2
NF1-219ENST00000579081 MUC12Q9UKN1 5478 aa1.33□□□□□ -2.2
NF1-219ENST00000579081 SYNE2Q8WXH0 6885 aaKnown RBP1.32□□□□□ -2.2
NF1-219ENST00000579081 KRTAP6-1Q3LI64 71 aa1.32□□□□□ -2.2
NF1-219ENST00000579081 KRTAP9-9Q9BYP9 154 aa1.28□□□□□ -2.2
NF1-219ENST00000579081 FSIP2Q5CZC0 6907 aa1.28□□□□□ -2.2
NF1-219ENST00000579081 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.21
NF1-219ENST00000579081 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.25□□□□□ -2.21
NF1-219ENST00000579081 GPR98Q8WXG9 6306 aa1.25□□□□□ -2.21
NF1-219ENST00000579081 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
NF1-219ENST00000579081 KRTAP5-9P26371 169 aa1.19□□□□□ -2.22
NF1-219ENST00000579081 KRTAP20-2Q3LI61 65 aa1.19□□□□□ -2.22
NF1-219ENST00000579081 KRTAP4-11Q9BYQ6 195 aa1.18□□□□□ -2.22
NF1-219ENST00000579081 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
NF1-219ENST00000579081 NEBP20929 6669 aa1.11□□□□□ -2.23
NF1-219ENST00000579081 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
NF1-219ENST00000579081 MACF1Q9UPN3 7388 aaKnown RBP1.11□□□□□ -2.23
NF1-219ENST00000579081 KRTAP4-4Q9BYR3 166 aa1.09□□□□□ -2.23
NF1-219ENST00000579081 KRTAP4-12Q9BQ66 201 aa1.08□□□□□ -2.24
NF1-219ENST00000579081 KRTAP4-2Q9BYR5 136 aa1.08□□□□□ -2.24
NF1-219ENST00000579081 KRTAP4-6Q9BYQ5 205 aa1.07□□□□□ -2.24
NF1-219ENST00000579081 MUC5ACP98088 5654 aa1.04□□□□□ -2.24
NF1-219ENST00000579081 KRTAP5-4Q6L8H1 288 aa1.03□□□□□ -2.24
NF1-219ENST00000579081 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.25
NF1-219ENST00000579081 HMCN1Q96RW7 5635 aa1.01□□□□□ -2.25
NF1-219ENST00000579081 KRTAP5-5Q701N2 237 aaPredicted RBP0.98□□□□□ -2.25
NF1-219ENST00000579081 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.97□□□□□ -2.25
NF1-219ENST00000579081 KRTAP5-3Q6L8H2 238 aa0.95□□□□□ -2.26
NF1-219ENST00000579081 KRTAP5-8O75690 187 aa0.92□□□□□ -2.26
NF1-219ENST00000579081 KRTAP5-11Q6L8G4 156 aa0.89□□□□□ -2.27
NF1-219ENST00000579081 KRTAP5-2Q701N4 177 aa0.88□□□□□ -2.27
NF1-219ENST00000579081 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
NF1-219ENST00000579081 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
NF1-219ENST00000579081 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
NF1-219ENST00000579081 KRTAP5-1Q6L8H4 278 aa0.81□□□□□ -2.28
NF1-219ENST00000579081 KRTAP5-7Q6L8G8 165 aa0.79□□□□□ -2.28
NF1-219ENST00000579081 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
NF1-219ENST00000579081 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms