RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 MUC12Q9UKN1 5478 aa5.68□□□□□ -1.5
DDX42-208ENST00000578681 FCGBPQ9Y6R7 5405 aaPredicted RBP5.66□□□□□ -1.5
DDX42-208ENST00000578681 MT1GP13640 62 aa5.65□□□□□ -1.51
DDX42-208ENST00000578681 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
DDX42-208ENST00000578681 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
DDX42-208ENST00000578681 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
DDX42-208ENST00000578681 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
DDX42-208ENST00000578681 KRTAP19-3Q7Z4W3 81 aa5.49□□□□□ -1.53
DDX42-208ENST00000578681 MACF1Q9UPN3 7388 aaKnown RBP5.46□□□□□ -1.54
DDX42-208ENST00000578681 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
DDX42-208ENST00000578681 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
DDX42-208ENST00000578681 LCE2DQ5TA82 110 aaPredicted RBP5.42□□□□□ -1.54
DDX42-208ENST00000578681 MT1MQ8N339 61 aa5.42□□□□□ -1.54
DDX42-208ENST00000578681 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
DDX42-208ENST00000578681 SPRR2EP22531 72 aa5.33□□□□□ -1.56
DDX42-208ENST00000578681 SPRR2BP35325 72 aa5.33□□□□□ -1.56
DDX42-208ENST00000578681 SPRR2AP35326 72 aa5.33□□□□□ -1.56
DDX42-208ENST00000578681 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
DDX42-208ENST00000578681 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
DDX42-208ENST00000578681 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
DDX42-208ENST00000578681 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
DDX42-208ENST00000578681 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
DDX42-208ENST00000578681 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
DDX42-208ENST00000578681 SPRR2DP22532 72 aa5.09□□□□□ -1.59
DDX42-208ENST00000578681 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
DDX42-208ENST00000578681 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
DDX42-208ENST00000578681 PRM1P04553 51 aa4.97□□□□□ -1.61
DDX42-208ENST00000578681 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.62
DDX42-208ENST00000578681 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
DDX42-208ENST00000578681 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.82□□□□□ -1.64
DDX42-208ENST00000578681 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
DDX42-208ENST00000578681 MT1AP04731 61 aa4.8□□□□□ -1.64
DDX42-208ENST00000578681 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
DDX42-208ENST00000578681 KRTAP5-9P26371 169 aa4.73□□□□□ -1.65
DDX42-208ENST00000578681 MUC19Q7Z5P9 8384 aa4.68□□□□□ -1.66
DDX42-208ENST00000578681 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
DDX42-208ENST00000578681 KRTAP9-7A8MTY7 169 aa4.67□□□□□ -1.66
DDX42-208ENST00000578681 MT4P47944 62 aa4.66□□□□□ -1.66
DDX42-208ENST00000578681 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
DDX42-208ENST00000578681 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
DDX42-208ENST00000578681 MT3P25713 68 aa4.54□□□□□ -1.68
DDX42-208ENST00000578681 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
DDX42-208ENST00000578681 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
DDX42-208ENST00000578681 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
DDX42-208ENST00000578681 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
DDX42-208ENST00000578681 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
DDX42-208ENST00000578681 NEBP20929 6669 aa4.32□□□□□ -1.72
DDX42-208ENST00000578681 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
DDX42-208ENST00000578681 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
DDX42-208ENST00000578681 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
DDX42-208ENST00000578681 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
DDX42-208ENST00000578681 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
DDX42-208ENST00000578681 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
DDX42-208ENST00000578681 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
DDX42-208ENST00000578681 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
DDX42-208ENST00000578681 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
DDX42-208ENST00000578681 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
DDX42-208ENST00000578681 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
DDX42-208ENST00000578681 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
DDX42-208ENST00000578681 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
DDX42-208ENST00000578681 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
DDX42-208ENST00000578681 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
DDX42-208ENST00000578681 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
DDX42-208ENST00000578681 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
DDX42-208ENST00000578681 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
DDX42-208ENST00000578681 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
DDX42-208ENST00000578681 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
DDX42-208ENST00000578681 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.91
DDX42-208ENST00000578681 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
DDX42-208ENST00000578681 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
DDX42-208ENST00000578681 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
DDX42-208ENST00000578681 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
DDX42-208ENST00000578681 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
DDX42-208ENST00000578681 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
DDX42-208ENST00000578681 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
DDX42-208ENST00000578681 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
DDX42-208ENST00000578681 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms