RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 USP24Q9UPU5 2620 aa0.79□□□□□ -2.28
PTP4A1-204ENST00000578299 M0QZ58 72 aa0.79□□□□□ -2.28
PTP4A1-204ENST00000578299 KRTAP21-3Q3LHN1 58 aa0.79□□□□□ -2.28
PTP4A1-204ENST00000578299 BIRC6Q9NR09 4857 aa0.78□□□□□ -2.28
PTP4A1-204ENST00000578299 INE1O15225 51 aa0.78□□□□□ -2.28
PTP4A1-204ENST00000578299 PCLOQ9Y6V0 5065 aa0.77□□□□□ -2.29
PTP4A1-204ENST00000578299 STAB1Q9NY15 2570 aa0.77□□□□□ -2.29
PTP4A1-204ENST00000578299 CRCT1Q9UGL9 99 aa0.76□□□□□ -2.29
PTP4A1-204ENST00000578299 KRTAP10-4P60372 401 aaPredicted RBP0.75□□□□□ -2.29
PTP4A1-204ENST00000578299 ABCA13Q86UQ4 5058 aa0.73□□□□□ -2.29
PTP4A1-204ENST00000578299 Q5VSD8 79 aa0.73□□□□□ -2.29
PTP4A1-204ENST00000578299 SMR3BP02814 79 aaPredicted RBP0.72□□□□□ -2.29
PTP4A1-204ENST00000578299 TNP1P09430 55 aa0.72□□□□□ -2.29
PTP4A1-204ENST00000578299 HMCN2Q8NDA2 5059 aa0.71□□□□□ -2.3
PTP4A1-204ENST00000578299 UBR4Q5T4S7 5183 aa0.7□□□□□ -2.3
PTP4A1-204ENST00000578299 EPPK1P58107 5090 aaKnown RBP0.7□□□□□ -2.3
PTP4A1-204ENST00000578299 KIAA1109Q2LD37 5005 aa0.7□□□□□ -2.3
PTP4A1-204ENST00000578299 KRTAP4-1Q9BYQ7 146 aa0.69□□□□□ -2.3
PTP4A1-204ENST00000578299 FCGBPQ9Y6R7 5405 aaPredicted RBP0.68□□□□□ -2.3
PTP4A1-204ENST00000578299 FAT4Q6V0I7 4981 aa0.68□□□□□ -2.3
PTP4A1-204ENST00000578299 MT1HL1P0DM35 61 aa0.66□□□□□ -2.3
PTP4A1-204ENST00000578299 KRTAP19-2Q3LHN2 52 aa0.66□□□□□ -2.3
PTP4A1-204ENST00000578299 KRTAP8-1Q8IUC2 63 aa0.66□□□□□ -2.3
PTP4A1-204ENST00000578299 MUC2Q02817 5179 aa0.63□□□□□ -2.31
PTP4A1-204ENST00000578299 KRTAP2-3P0C7H8 128 aa0.63□□□□□ -2.31
PTP4A1-204ENST00000578299 KRTAP2-4Q9BYR9 128 aa0.63□□□□□ -2.31
PTP4A1-204ENST00000578299 KRTAP2-1Q9BYU5 128 aa0.63□□□□□ -2.31
PTP4A1-204ENST00000578299 RNF213Q63HN8 5207 aa0.63□□□□□ -2.31
PTP4A1-204ENST00000578299 SPRR2GQ9BYE4 73 aa0.62□□□□□ -2.31
PTP4A1-204ENST00000578299 KMT2DO14686 5537 aa0.61□□□□□ -2.31
PTP4A1-204ENST00000578299 MT1XP80297 61 aa0.61□□□□□ -2.31
PTP4A1-204ENST00000578299 MT1FP04733 61 aa0.59□□□□□ -2.31
PTP4A1-204ENST00000578299 MT1BP07438 61 aa0.59□□□□□ -2.31
PTP4A1-204ENST00000578299 KRTAP19-5Q3LI72 72 aa0.59□□□□□ -2.31
PTP4A1-204ENST00000578299 SYNE1Q8NF91 8797 aaKnown RBP0.59□□□□□ -2.32
PTP4A1-204ENST00000578299 M0R2T5 61 aa0.58□□□□□ -2.32
PTP4A1-204ENST00000578299 KRTAP19-8Q3LI54 63 aa0.58□□□□□ -2.32
PTP4A1-204ENST00000578299 MT2AP02795 61 aa0.57□□□□□ -2.32
PTP4A1-204ENST00000578299 MT1HP80294 61 aa0.55□□□□□ -2.32
PTP4A1-204ENST00000578299 PRM1P04553 51 aa0.54□□□□□ -2.32
PTP4A1-204ENST00000578299 KRTAP19-7Q3SYF9 63 aa0.54□□□□□ -2.32
PTP4A1-204ENST00000578299 USH2AO75445 5202 aa0.53□□□□□ -2.32
PTP4A1-204ENST00000578299 MT1EP04732 61 aa0.53□□□□□ -2.32
PTP4A1-204ENST00000578299 MT1LQ93083 61 aa0.53□□□□□ -2.32
PTP4A1-204ENST00000578299 SSPOA2VEC9 5147 aa0.53□□□□□ -2.33
PTP4A1-204ENST00000578299 MT1GP13640 62 aa0.51□□□□□ -2.33
PTP4A1-204ENST00000578299 KRTAP6-2Q3LI66 62 aa0.49□□□□□ -2.33
PTP4A1-204ENST00000578299 MUC12Q9UKN1 5478 aa0.49□□□□□ -2.33
PTP4A1-204ENST00000578299 MT1MQ8N339 61 aa0.48□□□□□ -2.33
PTP4A1-204ENST00000578299 MT1AP04731 61 aa0.47□□□□□ -2.33
PTP4A1-204ENST00000578299 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
PTP4A1-204ENST00000578299 KRTAP6-1Q3LI64 71 aa0.46□□□□□ -2.34
PTP4A1-204ENST00000578299 KRTAP5-10Q6L8G5 202 aa0.46□□□□□ -2.34
PTP4A1-204ENST00000578299 SPRR2FQ96RM1 72 aa0.46□□□□□ -2.34
PTP4A1-204ENST00000578299 MUC16Q8WXI7 14507 aa0.45□□□□□ -2.34
PTP4A1-204ENST00000578299 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
PTP4A1-204ENST00000578299 SPRR2AP35326 72 aa0.42□□□□□ -2.34
PTP4A1-204ENST00000578299 MUC5ACP98088 5654 aa0.4□□□□□ -2.34
PTP4A1-204ENST00000578299 SPRR2EP22531 72 aa0.4□□□□□ -2.35
PTP4A1-204ENST00000578299 SPRR2DP22532 72 aa0.4□□□□□ -2.35
PTP4A1-204ENST00000578299 SPRR2BP35325 72 aa0.4□□□□□ -2.35
PTP4A1-204ENST00000578299 FSIP2Q5CZC0 6907 aa0.4□□□□□ -2.35
PTP4A1-204ENST00000578299 HMCN1Q96RW7 5635 aa0.4□□□□□ -2.35
PTP4A1-204ENST00000578299 KRTAP19-6Q3LI70 58 aa0.39□□□□□ -2.35
PTP4A1-204ENST00000578299 SYNE2Q8WXH0 6885 aaKnown RBP0.38□□□□□ -2.35
PTP4A1-204ENST00000578299 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
PTP4A1-204ENST00000578299 DSTQ03001 7570 aaKnown RBP0.32□□□□□ -2.36
PTP4A1-204ENST00000578299 MUC5BQ9HC84 5762 aaPredicted RBP0.32□□□□□ -2.36
PTP4A1-204ENST00000578299 MACF1Q9UPN3 7388 aaKnown RBP0.3□□□□□ -2.36
PTP4A1-204ENST00000578299 AHNAK2Q8IVF2 5795 aa0.29□□□□□ -2.36
PTP4A1-204ENST00000578299 KRTAP20-2Q3LI61 65 aa0.28□□□□□ -2.36
PTP4A1-204ENST00000578299 NEBP20929 6669 aa0.27□□□□□ -2.37
PTP4A1-204ENST00000578299 MT4P47944 62 aa0.27□□□□□ -2.37
PTP4A1-204ENST00000578299 KRTAP20-1Q3LI63 56 aa0.23□□□□□ -2.37
PTP4A1-204ENST00000578299 PHGR1C9JFL3 82 aa0.22□□□□□ -2.37
PTP4A1-204ENST00000578299 GPR98Q8WXG9 6306 aa0.17□□□□□ -2.38
PTP4A1-204ENST00000578299 AHNAKQ09666 5890 aaKnown RBP0.16□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 23.1 ms