RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
NDEL1-204ENST00000578172 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
NDEL1-204ENST00000578172 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
NDEL1-204ENST00000578172 MT1GP13640 62 aa4.68□□□□□ -1.66
NDEL1-204ENST00000578172 MT1LQ93083 61 aa4.64□□□□□ -1.67
NDEL1-204ENST00000578172 MT1EP04732 61 aa4.62□□□□□ -1.67
NDEL1-204ENST00000578172 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
NDEL1-204ENST00000578172 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
NDEL1-204ENST00000578172 KRTAP12-4P60329 112 aa4.53□□□□□ -1.69
NDEL1-204ENST00000578172 LCE3BQ5TA77 95 aa4.45□□□□□ -1.7
NDEL1-204ENST00000578172 LCE2DQ5TA82 110 aaPredicted RBP4.43□□□□□ -1.7
NDEL1-204ENST00000578172 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
NDEL1-204ENST00000578172 MT1MQ8N339 61 aa4.36□□□□□ -1.71
NDEL1-204ENST00000578172 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
NDEL1-204ENST00000578172 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
NDEL1-204ENST00000578172 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
NDEL1-204ENST00000578172 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
NDEL1-204ENST00000578172 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
NDEL1-204ENST00000578172 MDN1Q9NU22 5596 aa4.33□□□□□ -1.72
NDEL1-204ENST00000578172 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
NDEL1-204ENST00000578172 SPRR2EP22531 72 aa4.09□□□□□ -1.76
NDEL1-204ENST00000578172 SPRR2BP35325 72 aa4.09□□□□□ -1.76
NDEL1-204ENST00000578172 SPRR2AP35326 72 aa4.09□□□□□ -1.76
NDEL1-204ENST00000578172 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
NDEL1-204ENST00000578172 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
NDEL1-204ENST00000578172 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
NDEL1-204ENST00000578172 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
NDEL1-204ENST00000578172 PRM1P04553 51 aa4.02□□□□□ -1.77
NDEL1-204ENST00000578172 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
NDEL1-204ENST00000578172 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.78
NDEL1-204ENST00000578172 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.78
NDEL1-204ENST00000578172 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
NDEL1-204ENST00000578172 SPRR2DP22532 72 aa3.87□□□□□ -1.79
NDEL1-204ENST00000578172 MT1AP04731 61 aa3.82□□□□□ -1.8
NDEL1-204ENST00000578172 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
NDEL1-204ENST00000578172 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.7□□□□□ -1.82
NDEL1-204ENST00000578172 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
NDEL1-204ENST00000578172 MT4P47944 62 aa3.67□□□□□ -1.82
NDEL1-204ENST00000578172 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
NDEL1-204ENST00000578172 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
NDEL1-204ENST00000578172 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
NDEL1-204ENST00000578172 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.84
NDEL1-204ENST00000578172 MT3P25713 68 aa3.56□□□□□ -1.84
NDEL1-204ENST00000578172 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
NDEL1-204ENST00000578172 NEBP20929 6669 aa3.43□□□□□ -1.86
NDEL1-204ENST00000578172 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
NDEL1-204ENST00000578172 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
NDEL1-204ENST00000578172 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
NDEL1-204ENST00000578172 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.89
NDEL1-204ENST00000578172 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
NDEL1-204ENST00000578172 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
NDEL1-204ENST00000578172 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
NDEL1-204ENST00000578172 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
NDEL1-204ENST00000578172 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
NDEL1-204ENST00000578172 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
NDEL1-204ENST00000578172 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.92
NDEL1-204ENST00000578172 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
NDEL1-204ENST00000578172 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
NDEL1-204ENST00000578172 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
NDEL1-204ENST00000578172 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
NDEL1-204ENST00000578172 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
NDEL1-204ENST00000578172 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
NDEL1-204ENST00000578172 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
NDEL1-204ENST00000578172 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
NDEL1-204ENST00000578172 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
NDEL1-204ENST00000578172 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
NDEL1-204ENST00000578172 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
NDEL1-204ENST00000578172 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
NDEL1-204ENST00000578172 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
NDEL1-204ENST00000578172 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
NDEL1-204ENST00000578172 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
NDEL1-204ENST00000578172 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
NDEL1-204ENST00000578172 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
NDEL1-204ENST00000578172 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
NDEL1-204ENST00000578172 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.08
NDEL1-204ENST00000578172 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
NDEL1-204ENST00000578172 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
NDEL1-204ENST00000578172 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 115.2 ms