RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 LRP2P98164 4655 aa2.64□□□□□ -1.99
CDH8-203ENST00000577390 MT1LQ93083 61 aa2.64□□□□□ -1.99
CDH8-203ENST00000577390 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
CDH8-203ENST00000577390 KRTAP4-7Q9BYR0 210 aa2.61□□□□□ -1.99
CDH8-203ENST00000577390 KRTAP19-2Q3LHN2 52 aa2.61□□□□□ -1.99
CDH8-203ENST00000577390 KRTAP9-8Q9BYQ0 159 aa2.58□□□□□ -2
CDH8-203ENST00000577390 LOC100996750A0A140TA64 210 aa2.58□□□□□ -2
CDH8-203ENST00000577390 MT1EP04732 61 aa2.57□□□□□ -2
CDH8-203ENST00000577390 KRTAP4-9Q9BYQ8 210 aa2.56□□□□□ -2
CDH8-203ENST00000577390 HYDINQ4G0P3 5121 aa2.54□□□□□ -2
CDH8-203ENST00000577390 MT1AP04731 61 aa2.53□□□□□ -2
CDH8-203ENST00000577390 KMT2CQ8NEZ4 4911 aaKnown RBP2.53□□□□□ -2
CDH8-203ENST00000577390 RYR3Q15413 4870 aa2.52□□□□□ -2.01
CDH8-203ENST00000577390 KRTAP9-3Q9BYQ3 159 aa2.51□□□□□ -2.01
CDH8-203ENST00000577390 KRTAP9-9Q9BYP9 154 aa2.51□□□□□ -2.01
CDH8-203ENST00000577390 MT1MQ8N339 61 aa2.5□□□□□ -2.01
CDH8-203ENST00000577390 PCLOQ9Y6V0 5065 aa2.49□□□□□ -2.01
CDH8-203ENST00000577390 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.01
CDH8-203ENST00000577390 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.45□□□□□ -2.02
CDH8-203ENST00000577390 BIRC6Q9NR09 4857 aa2.42□□□□□ -2.02
CDH8-203ENST00000577390 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
CDH8-203ENST00000577390 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
CDH8-203ENST00000577390 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.03
CDH8-203ENST00000577390 RYR2Q92736 4967 aa2.38□□□□□ -2.03
CDH8-203ENST00000577390 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
CDH8-203ENST00000577390 FSIP2Q5CZC0 6907 aa2.36□□□□□ -2.03
CDH8-203ENST00000577390 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.04
CDH8-203ENST00000577390 HERC1Q15751 4861 aa2.27□□□□□ -2.05
CDH8-203ENST00000577390 KIAA1109Q2LD37 5005 aa2.24□□□□□ -2.05
CDH8-203ENST00000577390 HERC2O95714 4834 aa2.18□□□□□ -2.06
CDH8-203ENST00000577390 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
CDH8-203ENST00000577390 KRTAP9-4Q9BYQ2 154 aa2.17□□□□□ -2.06
CDH8-203ENST00000577390 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
CDH8-203ENST00000577390 EPPK1P58107 5090 aaKnown RBP2.15□□□□□ -2.07
CDH8-203ENST00000577390 MUC2Q02817 5179 aa2.14□□□□□ -2.07
CDH8-203ENST00000577390 UBR4Q5T4S7 5183 aa2.14□□□□□ -2.07
CDH8-203ENST00000577390 HMCN2Q8NDA2 5059 aa2.13□□□□□ -2.07
CDH8-203ENST00000577390 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
CDH8-203ENST00000577390 ABCA13Q86UQ4 5058 aa2.12□□□□□ -2.07
CDH8-203ENST00000577390 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.08
CDH8-203ENST00000577390 KRTAP4-6Q9BYQ5 205 aa2.08□□□□□ -2.08
CDH8-203ENST00000577390 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
CDH8-203ENST00000577390 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
CDH8-203ENST00000577390 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
CDH8-203ENST00000577390 RNF213Q63HN8 5207 aa2.04□□□□□ -2.08
CDH8-203ENST00000577390 MACF1Q9UPN3 7388 aaKnown RBP2□□□□□ -2.09
CDH8-203ENST00000577390 KMT2DO14686 5537 aa1.99□□□□□ -2.09
CDH8-203ENST00000577390 FAT4Q6V0I7 4981 aa1.97□□□□□ -2.09
CDH8-203ENST00000577390 DSTQ03001 7570 aaKnown RBP1.92□□□□□ -2.1
CDH8-203ENST00000577390 USH2AO75445 5202 aa1.81□□□□□ -2.12
CDH8-203ENST00000577390 OBSCNQ5VST9 7968 aa1.79□□□□□ -2.12
CDH8-203ENST00000577390 SSPOA2VEC9 5147 aa1.76□□□□□ -2.13
CDH8-203ENST00000577390 FCGBPQ9Y6R7 5405 aaPredicted RBP1.72□□□□□ -2.13
CDH8-203ENST00000577390 NEBP20929 6669 aa1.71□□□□□ -2.13
CDH8-203ENST00000577390 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
CDH8-203ENST00000577390 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
CDH8-203ENST00000577390 KRTAP5-9P26371 169 aa1.65□□□□□ -2.15
CDH8-203ENST00000577390 MDN1Q9NU22 5596 aa1.64□□□□□ -2.15
CDH8-203ENST00000577390 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.15
CDH8-203ENST00000577390 KRTAP5-4Q6L8H1 288 aa1.58□□□□□ -2.16
CDH8-203ENST00000577390 KRTAP5-3Q6L8H2 238 aa1.56□□□□□ -2.16
CDH8-203ENST00000577390 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
CDH8-203ENST00000577390 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CDH8-203ENST00000577390 GPR98Q8WXG9 6306 aa1.44□□□□□ -2.18
CDH8-203ENST00000577390 KRTAP5-2Q701N4 177 aa1.43□□□□□ -2.18
CDH8-203ENST00000577390 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
CDH8-203ENST00000577390 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
CDH8-203ENST00000577390 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
CDH8-203ENST00000577390 KRTAP5-1Q6L8H4 278 aa1.3□□□□□ -2.2
CDH8-203ENST00000577390 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
CDH8-203ENST00000577390 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
CDH8-203ENST00000577390 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
CDH8-203ENST00000577390 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
CDH8-203ENST00000577390 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.14□□□□□ -2.23
CDH8-203ENST00000577390 KRTAP5-11Q6L8G4 156 aa1.11□□□□□ -2.23
CDH8-203ENST00000577390 KRTAP5-7Q6L8G8 165 aa1.02□□□□□ -2.25
CDH8-203ENST00000577390 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms