RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 EPPK1P58107 5090 aaKnown RBP2.44□□□□□ -2.02
CTNS-210ENST00000576979 FLGP20930 4061 aaPredicted RBP2.43□□□□□ -2.02
CTNS-210ENST00000576979 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
CTNS-210ENST00000576979 ABCA13Q86UQ4 5058 aa2.42□□□□□ -2.02
CTNS-210ENST00000576979 M0R2T5 61 aa2.42□□□□□ -2.02
CTNS-210ENST00000576979 PRO2289Q9P1D8 64 aa2.41□□□□□ -2.02
CTNS-210ENST00000576979 SPRR2GQ9BYE4 73 aa2.4□□□□□ -2.03
CTNS-210ENST00000576979 HERC1Q15751 4861 aa2.39□□□□□ -2.03
CTNS-210ENST00000576979 BIRC6Q9NR09 4857 aa2.37□□□□□ -2.03
CTNS-210ENST00000576979 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
CTNS-210ENST00000576979 HERC2O95714 4834 aa2.34□□□□□ -2.03
CTNS-210ENST00000576979 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
CTNS-210ENST00000576979 MT1HP80294 61 aa2.34□□□□□ -2.03
CTNS-210ENST00000576979 MT2AP02795 61 aa2.32□□□□□ -2.04
CTNS-210ENST00000576979 MT1FP04733 61 aa2.3□□□□□ -2.04
CTNS-210ENST00000576979 KRTAP19-8Q3LI54 63 aa2.3□□□□□ -2.04
CTNS-210ENST00000576979 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
CTNS-210ENST00000576979 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
CTNS-210ENST00000576979 MT1BP07438 61 aa2.24□□□□□ -2.05
CTNS-210ENST00000576979 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
CTNS-210ENST00000576979 MT1XP80297 61 aa2.22□□□□□ -2.05
CTNS-210ENST00000576979 HMCN2Q8NDA2 5059 aa2.21□□□□□ -2.06
CTNS-210ENST00000576979 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
CTNS-210ENST00000576979 PCLOQ9Y6V0 5065 aa2.18□□□□□ -2.06
CTNS-210ENST00000576979 MUC2Q02817 5179 aa2.16□□□□□ -2.06
CTNS-210ENST00000576979 INE1O15225 51 aa2.15□□□□□ -2.07
CTNS-210ENST00000576979 RNF213Q63HN8 5207 aa2.15□□□□□ -2.07
CTNS-210ENST00000576979 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
CTNS-210ENST00000576979 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
CTNS-210ENST00000576979 UBR4Q5T4S7 5183 aa2.07□□□□□ -2.08
CTNS-210ENST00000576979 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
CTNS-210ENST00000576979 KRTAP19-7Q3SYF9 63 aa1.97□□□□□ -2.09
CTNS-210ENST00000576979 MT1LQ93083 61 aa1.95□□□□□ -2.1
CTNS-210ENST00000576979 MT1EP04732 61 aa1.94□□□□□ -2.1
CTNS-210ENST00000576979 KRTAP2-3P0C7H8 128 aa1.93□□□□□ -2.1
CTNS-210ENST00000576979 KRTAP2-4Q9BYR9 128 aa1.93□□□□□ -2.1
CTNS-210ENST00000576979 KRTAP2-1Q9BYU5 128 aa1.93□□□□□ -2.1
CTNS-210ENST00000576979 KRTAP19-6Q3LI70 58 aa1.89□□□□□ -2.11
CTNS-210ENST00000576979 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
CTNS-210ENST00000576979 USH2AO75445 5202 aa1.85□□□□□ -2.11
CTNS-210ENST00000576979 MT1GP13640 62 aa1.83□□□□□ -2.12
CTNS-210ENST00000576979 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
CTNS-210ENST00000576979 MT1MQ8N339 61 aa1.82□□□□□ -2.12
CTNS-210ENST00000576979 KMT2DO14686 5537 aa1.82□□□□□ -2.12
CTNS-210ENST00000576979 SSPOA2VEC9 5147 aa1.81□□□□□ -2.12
CTNS-210ENST00000576979 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
CTNS-210ENST00000576979 CRCT1Q9UGL9 99 aa1.78□□□□□ -2.12
CTNS-210ENST00000576979 SPRR2FQ96RM1 72 aa1.74□□□□□ -2.13
CTNS-210ENST00000576979 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
CTNS-210ENST00000576979 MT1AP04731 61 aa1.67□□□□□ -2.14
CTNS-210ENST00000576979 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
CTNS-210ENST00000576979 KRTAP6-1Q3LI64 71 aa1.63□□□□□ -2.15
CTNS-210ENST00000576979 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
CTNS-210ENST00000576979 SPRR2EP22531 72 aa1.6□□□□□ -2.15
CTNS-210ENST00000576979 SPRR2BP35325 72 aa1.6□□□□□ -2.15
CTNS-210ENST00000576979 SPRR2AP35326 72 aa1.6□□□□□ -2.15
CTNS-210ENST00000576979 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.15
CTNS-210ENST00000576979 SPRR2DP22532 72 aa1.54□□□□□ -2.16
CTNS-210ENST00000576979 PRM1P04553 51 aa1.52□□□□□ -2.17
CTNS-210ENST00000576979 FSIP2Q5CZC0 6907 aa1.5□□□□□ -2.17
CTNS-210ENST00000576979 DSTQ03001 7570 aaKnown RBP1.5□□□□□ -2.17
CTNS-210ENST00000576979 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
CTNS-210ENST00000576979 KRTAP6-2Q3LI66 62 aa1.47□□□□□ -2.17
CTNS-210ENST00000576979 MDN1Q9NU22 5596 aa1.39□□□□□ -2.19
CTNS-210ENST00000576979 SYNE2Q8WXH0 6885 aaKnown RBP1.38□□□□□ -2.19
CTNS-210ENST00000576979 MT4P47944 62 aa1.32□□□□□ -2.2
CTNS-210ENST00000576979 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
CTNS-210ENST00000576979 KRTAP20-1Q3LI63 56 aa1.25□□□□□ -2.21
CTNS-210ENST00000576979 NEBP20929 6669 aa1.22□□□□□ -2.21
CTNS-210ENST00000576979 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
CTNS-210ENST00000576979 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
CTNS-210ENST00000576979 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
CTNS-210ENST00000576979 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
CTNS-210ENST00000576979 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
CTNS-210ENST00000576979 MUC5BQ9HC84 5762 aaPredicted RBP0.91□□□□□ -2.26
CTNS-210ENST00000576979 PHGR1C9JFL3 82 aa0.83□□□□□ -2.28
CTNS-210ENST00000576979 GPR98Q8WXG9 6306 aa0.71□□□□□ -2.3
CTNS-210ENST00000576979 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 71.5 ms