RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 KRTAP4-3Q9BYR4 195 aa5.88□□□□□ -1.47
ATPAF1-214ENST00000576409 MT1EP04732 61 aa5.84□□□□□ -1.47
ATPAF1-214ENST00000576409 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
ATPAF1-214ENST00000576409 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
ATPAF1-214ENST00000576409 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
ATPAF1-214ENST00000576409 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
ATPAF1-214ENST00000576409 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
ATPAF1-214ENST00000576409 LCE3DQ9BYE3 92 aa5.64□□□□□ -1.51
ATPAF1-214ENST00000576409 MT1MQ8N339 61 aa5.58□□□□□ -1.52
ATPAF1-214ENST00000576409 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
ATPAF1-214ENST00000576409 SPRR2EP22531 72 aa5.57□□□□□ -1.52
ATPAF1-214ENST00000576409 SPRR2BP35325 72 aa5.57□□□□□ -1.52
ATPAF1-214ENST00000576409 SPRR2AP35326 72 aa5.57□□□□□ -1.52
ATPAF1-214ENST00000576409 LCE3EQ5T5B0 92 aa5.53□□□□□ -1.52
ATPAF1-214ENST00000576409 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
ATPAF1-214ENST00000576409 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
ATPAF1-214ENST00000576409 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
ATPAF1-214ENST00000576409 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
ATPAF1-214ENST00000576409 MUC12Q9UKN1 5478 aa5.46□□□□□ -1.53
ATPAF1-214ENST00000576409 PRM1P04553 51 aa5.37□□□□□ -1.55
ATPAF1-214ENST00000576409 KRTAP19-6Q3LI70 58 aa5.36□□□□□ -1.55
ATPAF1-214ENST00000576409 SPRR2DP22532 72 aa5.31□□□□□ -1.56
ATPAF1-214ENST00000576409 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
ATPAF1-214ENST00000576409 MACF1Q9UPN3 7388 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-214ENST00000576409 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-214ENST00000576409 SSPOA2VEC9 5147 aa5.11□□□□□ -1.59
ATPAF1-214ENST00000576409 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
ATPAF1-214ENST00000576409 MT1AP04731 61 aa5.03□□□□□ -1.6
ATPAF1-214ENST00000576409 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
ATPAF1-214ENST00000576409 MT3P25713 68 aa5.01□□□□□ -1.61
ATPAF1-214ENST00000576409 MT4P47944 62 aa4.96□□□□□ -1.62
ATPAF1-214ENST00000576409 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
ATPAF1-214ENST00000576409 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
ATPAF1-214ENST00000576409 MUC19Q7Z5P9 8384 aa4.84□□□□□ -1.63
ATPAF1-214ENST00000576409 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
ATPAF1-214ENST00000576409 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
ATPAF1-214ENST00000576409 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
ATPAF1-214ENST00000576409 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
ATPAF1-214ENST00000576409 MDN1Q9NU22 5596 aa4.68□□□□□ -1.66
ATPAF1-214ENST00000576409 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
ATPAF1-214ENST00000576409 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-214ENST00000576409 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
ATPAF1-214ENST00000576409 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
ATPAF1-214ENST00000576409 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-214ENST00000576409 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
ATPAF1-214ENST00000576409 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
ATPAF1-214ENST00000576409 NEBP20929 6669 aa4.15□□□□□ -1.75
ATPAF1-214ENST00000576409 KRTAP5-9P26371 169 aa4.12□□□□□ -1.75
ATPAF1-214ENST00000576409 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
ATPAF1-214ENST00000576409 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
ATPAF1-214ENST00000576409 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
ATPAF1-214ENST00000576409 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
ATPAF1-214ENST00000576409 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
ATPAF1-214ENST00000576409 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
ATPAF1-214ENST00000576409 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
ATPAF1-214ENST00000576409 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
ATPAF1-214ENST00000576409 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
ATPAF1-214ENST00000576409 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
ATPAF1-214ENST00000576409 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
ATPAF1-214ENST00000576409 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
ATPAF1-214ENST00000576409 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
ATPAF1-214ENST00000576409 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
ATPAF1-214ENST00000576409 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
ATPAF1-214ENST00000576409 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
ATPAF1-214ENST00000576409 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
ATPAF1-214ENST00000576409 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
ATPAF1-214ENST00000576409 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
ATPAF1-214ENST00000576409 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
ATPAF1-214ENST00000576409 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
ATPAF1-214ENST00000576409 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
ATPAF1-214ENST00000576409 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
ATPAF1-214ENST00000576409 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
ATPAF1-214ENST00000576409 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
ATPAF1-214ENST00000576409 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
ATPAF1-214ENST00000576409 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
ATPAF1-214ENST00000576409 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
ATPAF1-214ENST00000576409 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms