RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TLN1Q9Y490 2541 aaKnown RBP0.34□□□□□ -2.35
TOPBP1-210ENST00000572787 FREM2Q5SZK8 3169 aa0.33□□□□□ -2.36
TOPBP1-210ENST00000572787 MKI67P46013 3256 aaKnown RBP0.33□□□□□ -2.36
TOPBP1-210ENST00000572787 KMT2DO14686 5537 aa0.33□□□□□ -2.36
TOPBP1-210ENST00000572787 BOD1L1Q8NFC6 3051 aa0.32□□□□□ -2.36
TOPBP1-210ENST00000572787 DMDP11532 3685 aa0.31□□□□□ -2.36
TOPBP1-210ENST00000572787 CSMD2Q7Z408 3487 aa0.31□□□□□ -2.36
TOPBP1-210ENST00000572787 CENPEQ02224 2701 aa0.3□□□□□ -2.36
TOPBP1-210ENST00000572787 PCLOQ9Y6V0 5065 aa0.3□□□□□ -2.36
TOPBP1-210ENST00000572787 SZT2Q5T011 3432 aa0.29□□□□□ -2.36
TOPBP1-210ENST00000572787 MUC3AQ02505 3323 aa0.29□□□□□ -2.36
TOPBP1-210ENST00000572787 DCHS1Q96JQ0 3298 aa0.29□□□□□ -2.36
TOPBP1-210ENST00000572787 VPS13CQ709C8 3753 aa0.29□□□□□ -2.36
TOPBP1-210ENST00000572787 SSPOA2VEC9 5147 aa0.28□□□□□ -2.36
TOPBP1-210ENST00000572787 MYO9AB2RTY4 2548 aa0.27□□□□□ -2.37
TOPBP1-210ENST00000572787 SPRR2GQ9BYE4 73 aa0.27□□□□□ -2.37
TOPBP1-210ENST00000572787 WDFY4Q6ZS81 3184 aa0.27□□□□□ -2.37
TOPBP1-210ENST00000572787 HTN3P15516 51 aa0.26□□□□□ -2.37
TOPBP1-210ENST00000572787 KMT2CQ8NEZ4 4911 aaKnown RBP0.25□□□□□ -2.37
TOPBP1-210ENST00000572787 SRCAPQ6ZRS2 3230 aa0.25□□□□□ -2.37
TOPBP1-210ENST00000572787 LAMA2P24043 3122 aaKnown RBP0.24□□□□□ -2.37
TOPBP1-210ENST00000572787 KRTAP19-7Q3SYF9 63 aa0.23□□□□□ -2.37
TOPBP1-210ENST00000572787 XIRP2A4UGR9 3374 aa0.22□□□□□ -2.37
TOPBP1-210ENST00000572787 USH2AO75445 5202 aa0.2□□□□□ -2.38
TOPBP1-210ENST00000572787 KRTAP19-8Q3LI54 63 aa0.19□□□□□ -2.38
TOPBP1-210ENST00000572787 MT1GP13640 62 aa0.17□□□□□ -2.38
TOPBP1-210ENST00000572787 CEP350Q5VT06 3117 aa0.17□□□□□ -2.38
TOPBP1-210ENST00000572787 MYO15AQ9UKN7 3530 aa0.16□□□□□ -2.38
TOPBP1-210ENST00000572787 STARD9Q9P2P6 4700 aa0.16□□□□□ -2.38
TOPBP1-210ENST00000572787 LOC400499M0QZD8 3231 aa0.15□□□□□ -2.38
TOPBP1-210ENST00000572787 EYSQ5T1H1 3165 aa0.15□□□□□ -2.39
TOPBP1-210ENST00000572787 KRTAP6-1Q3LI64 71 aa0.13□□□□□ -2.39
TOPBP1-210ENST00000572787 GPR98Q8WXG9 6306 aa0.12□□□□□ -2.39
TOPBP1-210ENST00000572787 MT2AP02795 61 aa0.12□□□□□ -2.39
TOPBP1-210ENST00000572787 MT1MQ8N339 61 aa0.12□□□□□ -2.39
TOPBP1-210ENST00000572787 MUC2Q02817 5179 aa0.11□□□□□ -2.39
TOPBP1-210ENST00000572787 PCNTO95613 3336 aa0.11□□□□□ -2.39
TOPBP1-210ENST00000572787 DNHD1Q96M86 4753 aa0.09□□□□□ -2.39
TOPBP1-210ENST00000572787 UBR4Q5T4S7 5183 aa0.08□□□□□ -2.4
TOPBP1-210ENST00000572787 RYR1P21817 5038 aa0.08□□□□□ -2.4
TOPBP1-210ENST00000572787 MT1HL1P0DM35 61 aa0.08□□□□□ -2.4
TOPBP1-210ENST00000572787 MUC12Q9UKN1 5478 aa0.08□□□□□ -2.4
TOPBP1-210ENST00000572787 CFAP47Q6ZTR5 3102 aa0.07□□□□□ -2.4
TOPBP1-210ENST00000572787 SYNE2Q8WXH0 6885 aaKnown RBP0.04□□□□□ -2.4
TOPBP1-210ENST00000572787 FSIP2Q5CZC0 6907 aa0.03□□□□□ -2.4
TOPBP1-210ENST00000572787 USP34Q70CQ2 3546 aa0.02□□□□□ -2.41
TOPBP1-210ENST00000572787 ASPMQ8IZT6 3477 aa-0.03□□□□□ -2.41
TOPBP1-210ENST00000572787 MT4P47944 62 aa-0.06□□□□□ -2.42
TOPBP1-210ENST00000572787 MACF1Q9UPN3 7388 aaKnown RBP-0.06□□□□□ -2.42
TOPBP1-210ENST00000572787 SPEGQ15772 3267 aa-0.07□□□□□ -2.42
TOPBP1-210ENST00000572787 MT1BP07438 61 aa-0.07□□□□□ -2.42
TOPBP1-210ENST00000572787 HERC2O95714 4834 aa-0.09□□□□□ -2.42
TOPBP1-210ENST00000572787 VPS13AQ96RL7 3174 aa-0.09□□□□□ -2.42
TOPBP1-210ENST00000572787 UTRNP46939 3433 aa-0.1□□□□□ -2.42
TOPBP1-210ENST00000572787 KRTAP20-2Q3LI61 65 aa-0.1□□□□□ -2.43
TOPBP1-210ENST00000572787 UNC80Q8N2C7 3258 aa-0.11□□□□□ -2.43
TOPBP1-210ENST00000572787 EP400Q96L91 3159 aa-0.11□□□□□ -2.43
TOPBP1-210ENST00000572787 GOLGB1Q14789 3259 aaKnown RBP-0.12□□□□□ -2.43
TOPBP1-210ENST00000572787 VCANP13611 3396 aa-0.12□□□□□ -2.43
TOPBP1-210ENST00000572787 WDFY3Q8IZQ1 3526 aa-0.13□□□□□ -2.43
TOPBP1-210ENST00000572787 BIRC6Q9NR09 4857 aa-0.15□□□□□ -2.43
TOPBP1-210ENST00000572787 RYR3Q15413 4870 aa-0.15□□□□□ -2.43
TOPBP1-210ENST00000572787 MT1FP04733 61 aa-0.16□□□□□ -2.44
TOPBP1-210ENST00000572787 KRTAP19-2Q3LHN2 52 aa-0.16□□□□□ -2.44
TOPBP1-210ENST00000572787 BRCA2P51587 3418 aa-0.17□□□□□ -2.44
TOPBP1-210ENST00000572787 RNF213Q63HN8 5207 aa-0.19□□□□□ -2.44
TOPBP1-210ENST00000572787 EPPK1P58107 5090 aaKnown RBP-0.19□□□□□ -2.44
TOPBP1-210ENST00000572787 DSTQ03001 7570 aaKnown RBP-0.19□□□□□ -2.44
TOPBP1-210ENST00000572787 HYDINQ4G0P3 5121 aa-0.22□□□□□ -2.45
TOPBP1-210ENST00000572787 CENPFP49454 3210 aa-0.26□□□□□ -2.45
TOPBP1-210ENST00000572787 DNAH14Q0VDD8 3507 aa-0.33□□□□□ -2.46
TOPBP1-210ENST00000572787 KIAA1109Q2LD37 5005 aa-0.35□□□□□ -2.46
TOPBP1-210ENST00000572787 RYR2Q92736 4967 aa-0.39□□□□□ -2.47
TOPBP1-210ENST00000572787 NEBP20929 6669 aa-0.45□□□□□ -2.48
TOPBP1-210ENST00000572787 CDH23Q9H251 3354 aa-0.5□□□□□ -2.49
TOPBP1-210ENST00000572787 ABCA13Q86UQ4 5058 aa-0.53□□□□□ -2.49
TOPBP1-210ENST00000572787 KRTAP20-1Q3LI63 56 aa-0.73□□□□□ -2.53
TOPBP1-210ENST00000572787 KRTAP19-6Q3LI70 58 aa-0.77□□□□□ -2.53
Retrieved 78 of 20,778 RNA–protein pairs in 193.9 ms