RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 INE1O15225 51 aa3.06□□□□□ -1.92
ATXN3-250ENST00000568290 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
ATXN3-250ENST00000568290 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
ATXN3-250ENST00000568290 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
ATXN3-250ENST00000568290 MT1BP07438 61 aa3□□□□□ -1.93
ATXN3-250ENST00000568290 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
ATXN3-250ENST00000568290 MT1XP80297 61 aa2.99□□□□□ -1.93
ATXN3-250ENST00000568290 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
ATXN3-250ENST00000568290 PCLOQ9Y6V0 5065 aa2.93□□□□□ -1.94
ATXN3-250ENST00000568290 MUC2Q02817 5179 aa2.92□□□□□ -1.94
ATXN3-250ENST00000568290 RNF213Q63HN8 5207 aa2.87□□□□□ -1.95
ATXN3-250ENST00000568290 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
ATXN3-250ENST00000568290 FAT4Q6V0I7 4981 aa2.82□□□□□ -1.96
ATXN3-250ENST00000568290 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
ATXN3-250ENST00000568290 UBR4Q5T4S7 5183 aa2.74□□□□□ -1.97
ATXN3-250ENST00000568290 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
ATXN3-250ENST00000568290 KRTAP2-3P0C7H8 128 aa2.64□□□□□ -1.99
ATXN3-250ENST00000568290 KRTAP19-7Q3SYF9 63 aa2.64□□□□□ -1.99
ATXN3-250ENST00000568290 KRTAP2-4Q9BYR9 128 aa2.64□□□□□ -1.99
ATXN3-250ENST00000568290 KRTAP2-1Q9BYU5 128 aa2.64□□□□□ -1.99
ATXN3-250ENST00000568290 KRTAP19-6Q3LI70 58 aa2.63□□□□□ -1.99
ATXN3-250ENST00000568290 MT1LQ93083 61 aa2.63□□□□□ -1.99
ATXN3-250ENST00000568290 MT1EP04732 61 aa2.62□□□□□ -1.99
ATXN3-250ENST00000568290 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
ATXN3-250ENST00000568290 MT1GP13640 62 aa2.57□□□□□ -2
ATXN3-250ENST00000568290 KRTAP19-3Q7Z4W3 81 aa2.51□□□□□ -2.01
ATXN3-250ENST00000568290 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
ATXN3-250ENST00000568290 USH2AO75445 5202 aa2.47□□□□□ -2.01
ATXN3-250ENST00000568290 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
ATXN3-250ENST00000568290 MT1MQ8N339 61 aa2.45□□□□□ -2.02
ATXN3-250ENST00000568290 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
ATXN3-250ENST00000568290 MT1AP04731 61 aa2.36□□□□□ -2.03
ATXN3-250ENST00000568290 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
ATXN3-250ENST00000568290 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
ATXN3-250ENST00000568290 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
ATXN3-250ENST00000568290 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
ATXN3-250ENST00000568290 KMT2DO14686 5537 aa2.32□□□□□ -2.04
ATXN3-250ENST00000568290 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
ATXN3-250ENST00000568290 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
ATXN3-250ENST00000568290 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
ATXN3-250ENST00000568290 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
ATXN3-250ENST00000568290 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
ATXN3-250ENST00000568290 SPRR2EP22531 72 aa2.17□□□□□ -2.06
ATXN3-250ENST00000568290 SPRR2BP35325 72 aa2.17□□□□□ -2.06
ATXN3-250ENST00000568290 SPRR2AP35326 72 aa2.17□□□□□ -2.06
ATXN3-250ENST00000568290 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
ATXN3-250ENST00000568290 FSIP2Q5CZC0 6907 aa2.16□□□□□ -2.06
ATXN3-250ENST00000568290 SPRR2DP22532 72 aa2.1□□□□□ -2.07
ATXN3-250ENST00000568290 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
ATXN3-250ENST00000568290 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
ATXN3-250ENST00000568290 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
ATXN3-250ENST00000568290 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
ATXN3-250ENST00000568290 PRM1P04553 51 aa2.03□□□□□ -2.08
ATXN3-250ENST00000568290 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
ATXN3-250ENST00000568290 KRTAP5-2Q701N4 177 aa2.02□□□□□ -2.09
ATXN3-250ENST00000568290 MACF1Q9UPN3 7388 aaKnown RBP2.01□□□□□ -2.09
ATXN3-250ENST00000568290 DSTQ03001 7570 aaKnown RBP1.96□□□□□ -2.1
ATXN3-250ENST00000568290 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
ATXN3-250ENST00000568290 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
ATXN3-250ENST00000568290 SYNE2Q8WXH0 6885 aaKnown RBP1.9□□□□□ -2.11
ATXN3-250ENST00000568290 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.12
ATXN3-250ENST00000568290 KRTAP20-1Q3LI63 56 aa1.78□□□□□ -2.12
ATXN3-250ENST00000568290 NEBP20929 6669 aa1.77□□□□□ -2.13
ATXN3-250ENST00000568290 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
ATXN3-250ENST00000568290 MT4P47944 62 aa1.73□□□□□ -2.13
ATXN3-250ENST00000568290 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
ATXN3-250ENST00000568290 KRTAP5-8O75690 187 aa1.59□□□□□ -2.15
ATXN3-250ENST00000568290 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
ATXN3-250ENST00000568290 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
ATXN3-250ENST00000568290 KRTAP5-10Q6L8G5 202 aa1.55□□□□□ -2.16
ATXN3-250ENST00000568290 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
ATXN3-250ENST00000568290 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
ATXN3-250ENST00000568290 AHNAK2Q8IVF2 5795 aa1.32□□□□□ -2.2
ATXN3-250ENST00000568290 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
ATXN3-250ENST00000568290 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
ATXN3-250ENST00000568290 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
ATXN3-250ENST00000568290 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
ATXN3-250ENST00000568290 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 87.4 ms