RNA–Protein interactions for RNA: ENST00000566611.5

KATNB1-206, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 3,854 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-206ENST00000566611 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
KATNB1-206ENST00000566611 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
KATNB1-206ENST00000566611 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
KATNB1-206ENST00000566611 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
KATNB1-206ENST00000566611 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
KATNB1-206ENST00000566611 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.6
KATNB1-206ENST00000566611 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
KATNB1-206ENST00000566611 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
KATNB1-206ENST00000566611 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
KATNB1-206ENST00000566611 LCE3BQ5TA77 95 aa4.99□□□□□ -1.61
KATNB1-206ENST00000566611 MT1MQ8N339 61 aa4.96□□□□□ -1.62
KATNB1-206ENST00000566611 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
KATNB1-206ENST00000566611 SPRR2EP22531 72 aa4.89□□□□□ -1.63
KATNB1-206ENST00000566611 SPRR2BP35325 72 aa4.89□□□□□ -1.63
KATNB1-206ENST00000566611 SPRR2AP35326 72 aa4.89□□□□□ -1.63
KATNB1-206ENST00000566611 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
KATNB1-206ENST00000566611 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
KATNB1-206ENST00000566611 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
KATNB1-206ENST00000566611 LCE2DQ5TA82 110 aaPredicted RBP4.84□□□□□ -1.64
KATNB1-206ENST00000566611 KRTAP2-3P0C7H8 128 aa4.77□□□□□ -1.65
KATNB1-206ENST00000566611 KRTAP2-4Q9BYR9 128 aa4.77□□□□□ -1.65
KATNB1-206ENST00000566611 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
KATNB1-206ENST00000566611 SPRR2DP22532 72 aa4.67□□□□□ -1.66
KATNB1-206ENST00000566611 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
KATNB1-206ENST00000566611 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
KATNB1-206ENST00000566611 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
KATNB1-206ENST00000566611 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
KATNB1-206ENST00000566611 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
KATNB1-206ENST00000566611 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
KATNB1-206ENST00000566611 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
KATNB1-206ENST00000566611 MT1AP04731 61 aa4.43□□□□□ -1.7
KATNB1-206ENST00000566611 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
KATNB1-206ENST00000566611 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.32□□□□□ -1.72
KATNB1-206ENST00000566611 MT4P47944 62 aa4.28□□□□□ -1.72
KATNB1-206ENST00000566611 PRM1P04553 51 aa4.25□□□□□ -1.73
KATNB1-206ENST00000566611 MT3P25713 68 aa4.24□□□□□ -1.73
KATNB1-206ENST00000566611 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
KATNB1-206ENST00000566611 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
KATNB1-206ENST00000566611 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
KATNB1-206ENST00000566611 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
KATNB1-206ENST00000566611 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
KATNB1-206ENST00000566611 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
KATNB1-206ENST00000566611 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
KATNB1-206ENST00000566611 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
KATNB1-206ENST00000566611 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
KATNB1-206ENST00000566611 NEBP20929 6669 aa3.83□□□□□ -1.8
KATNB1-206ENST00000566611 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
KATNB1-206ENST00000566611 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
KATNB1-206ENST00000566611 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
KATNB1-206ENST00000566611 LCE4AQ5TA78 99 aa3.71□□□□□ -1.81
KATNB1-206ENST00000566611 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
KATNB1-206ENST00000566611 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
KATNB1-206ENST00000566611 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
KATNB1-206ENST00000566611 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
KATNB1-206ENST00000566611 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
KATNB1-206ENST00000566611 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
KATNB1-206ENST00000566611 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
KATNB1-206ENST00000566611 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
KATNB1-206ENST00000566611 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
KATNB1-206ENST00000566611 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
KATNB1-206ENST00000566611 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
KATNB1-206ENST00000566611 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
KATNB1-206ENST00000566611 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
KATNB1-206ENST00000566611 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
KATNB1-206ENST00000566611 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
KATNB1-206ENST00000566611 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
KATNB1-206ENST00000566611 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
KATNB1-206ENST00000566611 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
KATNB1-206ENST00000566611 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
KATNB1-206ENST00000566611 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
KATNB1-206ENST00000566611 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
KATNB1-206ENST00000566611 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
KATNB1-206ENST00000566611 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
KATNB1-206ENST00000566611 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
KATNB1-206ENST00000566611 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
KATNB1-206ENST00000566611 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
KATNB1-206ENST00000566611 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
KATNB1-206ENST00000566611 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 80.5 ms