RNA–Protein interactions for RNA: ENST00000566611.5

KATNB1-206, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 3,854 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-206ENST00000566611 NISCHQ9Y2I1 1504 aa29.59■■■□□ 2.33
KATNB1-206ENST00000566611 DCAF8L2P0C7V8 631 aa27.36■■□□□ 1.97
KATNB1-206ENST00000566611 SHROOM4Q9ULL8 1493 aa26.94■■□□□ 1.9
KATNB1-206ENST00000566611 SUPT5HO00267 1087 aaKnown RBP26.73■■□□□ 1.87
KATNB1-206ENST00000566611 EHMT2Q96KQ7 1210 aa25.29■■□□□ 1.64
KATNB1-206ENST00000566611 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
KATNB1-206ENST00000566611 CHIC1Q5VXU3 224 aa24.89■■□□□ 1.58
KATNB1-206ENST00000566611 PCGF6Q9BYE7 350 aa24.89■■□□□ 1.58
KATNB1-206ENST00000566611 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
KATNB1-206ENST00000566611 TRIM41Q8WV44 630 aa24.65■■□□□ 1.54
KATNB1-206ENST00000566611 LOC105371045A0A1W2PR82 267 aa24.65■■□□□ 1.54
KATNB1-206ENST00000566611 CCDC180Q9P1Z9 1646 aa24.57■■□□□ 1.52
KATNB1-206ENST00000566611 ABCC9O60706 1549 aa24.53■■□□□ 1.52
KATNB1-206ENST00000566611 TTBK1Q5TCY1 1321 aaPredicted RBP24.36■■□□□ 1.49
KATNB1-206ENST00000566611 PPARGC1BQ86YN6 1023 aaKnown RBP24.23■■□□□ 1.47
KATNB1-206ENST00000566611 HRCP23327 699 aa24.08■■□□□ 1.45
KATNB1-206ENST00000566611 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
KATNB1-206ENST00000566611 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
KATNB1-206ENST00000566611 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
KATNB1-206ENST00000566611 PABPN1Q86U42 306 aaKnown RBP eCLIP23.97■■□□□ 1.43
KATNB1-206ENST00000566611 TRIM26Q12899 539 aaPredicted RBP23.95■■□□□ 1.42
KATNB1-206ENST00000566611 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.42
KATNB1-206ENST00000566611 APLP2Q06481 763 aa23.71■■□□□ 1.39
KATNB1-206ENST00000566611 CCER1Q8TC90 406 aaPredicted RBP23.7■■□□□ 1.39
KATNB1-206ENST00000566611 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
KATNB1-206ENST00000566611 DCAF1Q9Y4B6 1507 aa23.62■■□□□ 1.37
KATNB1-206ENST00000566611 ZEB1P37275 1124 aaPredicted RBP23.58■■□□□ 1.37
KATNB1-206ENST00000566611 CECR2Q9BXF3 1484 aa23.42■■□□□ 1.34
KATNB1-206ENST00000566611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.41■■□□□ 1.34
KATNB1-206ENST00000566611 NACADO15069 1562 aa23.29■■□□□ 1.32
KATNB1-206ENST00000566611 ATP1B4Q9UN42 357 aaPredicted RBP23.26■■□□□ 1.31
KATNB1-206ENST00000566611 HNRNPUL2Q1KMD3 747 aaKnown RBP23.26■■□□□ 1.31
KATNB1-206ENST00000566611 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
KATNB1-206ENST00000566611 CSRNP3Q8WYN3 585 aa23.14■■□□□ 1.3
KATNB1-206ENST00000566611 MROH2BQ7Z745 1585 aa23.13■■□□□ 1.29
KATNB1-206ENST00000566611 ITGAEP38570 1179 aa23.06■■□□□ 1.28
KATNB1-206ENST00000566611 YTHDC1Q96MU7 727 aaKnown RBP22.97■■□□□ 1.27
KATNB1-206ENST00000566611 WIZO95785 1651 aa22.89■■□□□ 1.25
KATNB1-206ENST00000566611 BAZ1AQ9NRL2 1556 aaPredicted RBP22.87■■□□□ 1.25
KATNB1-206ENST00000566611 CENPBP07199 599 aaPredicted RBP22.83■■□□□ 1.24
KATNB1-206ENST00000566611 DIEXFQ68CQ4 756 aaKnown RBP22.76■■□□□ 1.23
KATNB1-206ENST00000566611 ABCC8Q09428 1581 aa22.73■■□□□ 1.23
KATNB1-206ENST00000566611 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
KATNB1-206ENST00000566611 SOGA1O94964 1423 aa22.71■■□□□ 1.23
KATNB1-206ENST00000566611 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
KATNB1-206ENST00000566611 WRNQ14191 1432 aaPredicted RBP eCLIP22.64■■□□□ 1.21
KATNB1-206ENST00000566611 P3H3Q8IVL6 736 aa22.63■■□□□ 1.21
KATNB1-206ENST00000566611 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
KATNB1-206ENST00000566611 FAM50AQ14320 339 aaKnown RBP22.53■■□□□ 1.2
KATNB1-206ENST00000566611 CLIP1P30622 1438 aa22.49■■□□□ 1.19
KATNB1-206ENST00000566611 TNIKQ9UKE5 1360 aa22.47■■□□□ 1.19
KATNB1-206ENST00000566611 TOP2AP11388 1531 aaKnown RBP22.45■■□□□ 1.18
KATNB1-206ENST00000566611 GOLGA3Q08378 1498 aa22.44■■□□□ 1.18
KATNB1-206ENST00000566611 ZNF316A6NFI3 1004 aaPredicted RBP22.42■■□□□ 1.18
KATNB1-206ENST00000566611 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
KATNB1-206ENST00000566611 EEA1Q15075 1411 aa22.42■■□□□ 1.18
KATNB1-206ENST00000566611 RUSC2Q8N2Y8 1516 aa22.41■■□□□ 1.18
KATNB1-206ENST00000566611 NEUROD1Q13562 356 aa22.36■■□□□ 1.17
KATNB1-206ENST00000566611 ARID3CA6NKF2 412 aa22.29■■□□□ 1.16
KATNB1-206ENST00000566611 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
KATNB1-206ENST00000566611 GTF3C3Q9Y5Q9 886 aa22.28■■□□□ 1.16
KATNB1-206ENST00000566611 SMARCA2P51531 1590 aa22.24■■□□□ 1.15
KATNB1-206ENST00000566611 ATAD2BQ9ULI0 1458 aa22.22■■□□□ 1.15
KATNB1-206ENST00000566611 ACIN1Q9UKV3 1341 aaKnown RBP22.19■■□□□ 1.14
KATNB1-206ENST00000566611 PELP1Q8IZL8 1130 aaKnown RBP22.17■■□□□ 1.14
KATNB1-206ENST00000566611 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
KATNB1-206ENST00000566611 KIF27Q86VH2 1401 aa22.11■■□□□ 1.13
KATNB1-206ENST00000566611 CNGB1Q14028 1251 aaPredicted RBP22.08■■□□□ 1.13
KATNB1-206ENST00000566611 FBLN2P98095 1184 aa22.06■■□□□ 1.12
KATNB1-206ENST00000566611 KANK4Q5T7N3 995 aaPredicted RBP22.06■■□□□ 1.12
KATNB1-206ENST00000566611 TRIM52Q96A61 297 aa22.06■■□□□ 1.12
KATNB1-206ENST00000566611 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
KATNB1-206ENST00000566611 MIER1Q8N108 512 aa22.05■■□□□ 1.12
KATNB1-206ENST00000566611 VPS8Q8N3P4 1428 aa22■■□□□ 1.11
KATNB1-206ENST00000566611 BICRAQ9NZM4 1560 aa22■■□□□ 1.11
KATNB1-206ENST00000566611 POLR3GLQ9BT43 218 aa22■■□□□ 1.11
KATNB1-206ENST00000566611 CUX2O14529 1486 aa21.97■■□□□ 1.11
KATNB1-206ENST00000566611 UNC13AQ9UPW8 1703 aa21.94■■□□□ 1.1
KATNB1-206ENST00000566611 HIRIP3Q9BW71 556 aaPredicted RBP21.9■■□□□ 1.1
KATNB1-206ENST00000566611 NEFLP07196 543 aa21.88■■□□□ 1.09
KATNB1-206ENST00000566611 CHIC2Q9UKJ5 165 aa21.88■■□□□ 1.09
KATNB1-206ENST00000566611 CARMIL1Q5VZK9 1371 aa21.88■■□□□ 1.09
KATNB1-206ENST00000566611 DDX10Q13206 875 aaKnown RBP21.83■■□□□ 1.08
KATNB1-206ENST00000566611 SYNJ1O43426 1573 aa21.83■■□□□ 1.08
KATNB1-206ENST00000566611 MTUS2Q5JR59 1369 aa21.79■■□□□ 1.08
KATNB1-206ENST00000566611 BCANQ96GW7 911 aa21.79■■□□□ 1.08
KATNB1-206ENST00000566611 SIN3AQ96ST3 1273 aa21.77■■□□□ 1.07
KATNB1-206ENST00000566611 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.07
KATNB1-206ENST00000566611 ZNF326Q5BKZ1 582 aaKnown RBP21.76■■□□□ 1.07
KATNB1-206ENST00000566611 CCNB3Q8WWL7 1395 aa21.75■■□□□ 1.07
KATNB1-206ENST00000566611 CADPSQ9ULU8 1353 aa21.75■■□□□ 1.07
KATNB1-206ENST00000566611 EIF4G1Q04637 1599 aaKnown RBP21.75■■□□□ 1.07
KATNB1-206ENST00000566611 RRP7BPQ9NSQ0 103 aa21.7■■□□□ 1.06
KATNB1-206ENST00000566611 ANP32CO43423 234 aa21.7■■□□□ 1.06
KATNB1-206ENST00000566611 TDRD9Q8NDG6 1382 aaKnown RBP21.69■■□□□ 1.06
KATNB1-206ENST00000566611 TONSLQ96HA7 1378 aa21.67■■□□□ 1.06
KATNB1-206ENST00000566611 NCAPD3P42695 1498 aa21.66■■□□□ 1.06
KATNB1-206ENST00000566611 MYT1LQ9UL68 1186 aa21.64■■□□□ 1.05
KATNB1-206ENST00000566611 KIF21BO75037 1637 aa21.57■■□□□ 1.04
KATNB1-206ENST00000566611 IGF1RP08069 1367 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms