RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 HERC1Q15751 4861 aa2.17□□□□□ -2.06
CHD9-210ENST00000564582 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
CHD9-210ENST00000564582 KRTAP19-2Q3LHN2 52 aa2.16□□□□□ -2.06
CHD9-210ENST00000564582 RYR2Q92736 4967 aa2.14□□□□□ -2.07
CHD9-210ENST00000564582 LRP2P98164 4655 aa2.12□□□□□ -2.07
CHD9-210ENST00000564582 RYR1P21817 5038 aa2.11□□□□□ -2.07
CHD9-210ENST00000564582 KRTAP19-8Q3LI54 63 aa2.09□□□□□ -2.07
CHD9-210ENST00000564582 MUC17Q685J3 4493 aa2.09□□□□□ -2.08
CHD9-210ENST00000564582 KMT2CQ8NEZ4 4911 aaKnown RBP2.09□□□□□ -2.08
CHD9-210ENST00000564582 KIAA1109Q2LD37 5005 aa2.07□□□□□ -2.08
CHD9-210ENST00000564582 RYR3Q15413 4870 aa2.07□□□□□ -2.08
CHD9-210ENST00000564582 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
CHD9-210ENST00000564582 BIRC6Q9NR09 4857 aa2.05□□□□□ -2.08
CHD9-210ENST00000564582 M0R2T5 61 aa2.04□□□□□ -2.08
CHD9-210ENST00000564582 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
CHD9-210ENST00000564582 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
CHD9-210ENST00000564582 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
CHD9-210ENST00000564582 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
CHD9-210ENST00000564582 LPAP08519 4548 aa2.02□□□□□ -2.09
CHD9-210ENST00000564582 MUC2Q02817 5179 aa1.98□□□□□ -2.09
CHD9-210ENST00000564582 MT1XP80297 61 aa1.97□□□□□ -2.09
CHD9-210ENST00000564582 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
CHD9-210ENST00000564582 MT2AP02795 61 aa1.92□□□□□ -2.1
CHD9-210ENST00000564582 EPPK1P58107 5090 aaKnown RBP1.91□□□□□ -2.1
CHD9-210ENST00000564582 MT1BP07438 61 aa1.91□□□□□ -2.1
CHD9-210ENST00000564582 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
CHD9-210ENST00000564582 HERC2O95714 4834 aa1.9□□□□□ -2.11
CHD9-210ENST00000564582 MT1HP80294 61 aa1.89□□□□□ -2.11
CHD9-210ENST00000564582 KRTAP19-5Q3LI72 72 aa1.89□□□□□ -2.11
CHD9-210ENST00000564582 MT1FP04733 61 aa1.88□□□□□ -2.11
CHD9-210ENST00000564582 MT1EP04732 61 aa1.85□□□□□ -2.11
CHD9-210ENST00000564582 ABCA13Q86UQ4 5058 aa1.83□□□□□ -2.12
CHD9-210ENST00000564582 MT1LQ93083 61 aa1.82□□□□□ -2.12
CHD9-210ENST00000564582 KRTAP6-3Q3LI67 103 aa1.81□□□□□ -2.12
CHD9-210ENST00000564582 HMCN2Q8NDA2 5059 aa1.8□□□□□ -2.12
CHD9-210ENST00000564582 MT1AP04731 61 aa1.77□□□□□ -2.13
CHD9-210ENST00000564582 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
CHD9-210ENST00000564582 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
CHD9-210ENST00000564582 MT1GP13640 62 aa1.69□□□□□ -2.14
CHD9-210ENST00000564582 FAT4Q6V0I7 4981 aa1.68□□□□□ -2.14
CHD9-210ENST00000564582 CRCT1Q9UGL9 99 aa1.67□□□□□ -2.14
CHD9-210ENST00000564582 FSIP2Q5CZC0 6907 aa1.64□□□□□ -2.15
CHD9-210ENST00000564582 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
CHD9-210ENST00000564582 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
CHD9-210ENST00000564582 KRTAP19-3Q7Z4W3 81 aa1.6□□□□□ -2.15
CHD9-210ENST00000564582 MT1MQ8N339 61 aa1.59□□□□□ -2.15
CHD9-210ENST00000564582 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
CHD9-210ENST00000564582 PRM1P04553 51 aa1.58□□□□□ -2.16
CHD9-210ENST00000564582 SPRR2FQ96RM1 72 aa1.57□□□□□ -2.16
CHD9-210ENST00000564582 SPRR2AP35326 72 aa1.56□□□□□ -2.16
CHD9-210ENST00000564582 MACF1Q9UPN3 7388 aaKnown RBP1.55□□□□□ -2.16
CHD9-210ENST00000564582 SSPOA2VEC9 5147 aa1.53□□□□□ -2.16
CHD9-210ENST00000564582 KRTAP19-6Q3LI70 58 aa1.53□□□□□ -2.16
CHD9-210ENST00000564582 NEBP20929 6669 aa1.52□□□□□ -2.17
CHD9-210ENST00000564582 SPRR2BP35325 72 aa1.5□□□□□ -2.17
CHD9-210ENST00000564582 KRTAP20-1Q3LI63 56 aa1.5□□□□□ -2.17
CHD9-210ENST00000564582 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
CHD9-210ENST00000564582 SYNE2Q8WXH0 6885 aaKnown RBP1.47□□□□□ -2.17
CHD9-210ENST00000564582 SPRR2EP22531 72 aa1.45□□□□□ -2.18
CHD9-210ENST00000564582 KRTAP6-2Q3LI66 62 aa1.45□□□□□ -2.18
CHD9-210ENST00000564582 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
CHD9-210ENST00000564582 SPRR2DP22532 72 aa1.41□□□□□ -2.18
CHD9-210ENST00000564582 KMT2DO14686 5537 aa1.4□□□□□ -2.19
CHD9-210ENST00000564582 USH2AO75445 5202 aa1.39□□□□□ -2.19
CHD9-210ENST00000564582 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
CHD9-210ENST00000564582 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
CHD9-210ENST00000564582 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
CHD9-210ENST00000564582 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
CHD9-210ENST00000564582 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.2
CHD9-210ENST00000564582 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
CHD9-210ENST00000564582 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
CHD9-210ENST00000564582 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
CHD9-210ENST00000564582 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
CHD9-210ENST00000564582 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
CHD9-210ENST00000564582 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
CHD9-210ENST00000564582 MT4P47944 62 aa0.88□□□□□ -2.27
CHD9-210ENST00000564582 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
CHD9-210ENST00000564582 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 291.3 ms