RNA–Protein interactions for RNA: ENST00000564448.5

CNGB1-204, Transcript of cyclic nucleotide gated channel beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGB1, Length 4,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGB1-204ENST00000564448 SPRR2DP22532 72 aa3.95□□□□□ -1.78
CNGB1-204ENST00000564448 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
CNGB1-204ENST00000564448 LCE3BQ5TA77 95 aa3.94□□□□□ -1.78
CNGB1-204ENST00000564448 MT1GP13640 62 aa3.93□□□□□ -1.78
CNGB1-204ENST00000564448 USH2AO75445 5202 aa3.91□□□□□ -1.78
CNGB1-204ENST00000564448 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
CNGB1-204ENST00000564448 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
CNGB1-204ENST00000564448 KRTAP9-7A8MTY7 169 aa3.78□□□□□ -1.8
CNGB1-204ENST00000564448 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
CNGB1-204ENST00000564448 KMT2DO14686 5537 aa3.73□□□□□ -1.81
CNGB1-204ENST00000564448 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
CNGB1-204ENST00000564448 MT1EP04732 61 aa3.7□□□□□ -1.82
CNGB1-204ENST00000564448 MT1LQ93083 61 aa3.7□□□□□ -1.82
CNGB1-204ENST00000564448 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
CNGB1-204ENST00000564448 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.69□□□□□ -1.82
CNGB1-204ENST00000564448 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
CNGB1-204ENST00000564448 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
CNGB1-204ENST00000564448 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
CNGB1-204ENST00000564448 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.83
CNGB1-204ENST00000564448 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
CNGB1-204ENST00000564448 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
CNGB1-204ENST00000564448 MT1MQ8N339 61 aa3.57□□□□□ -1.84
CNGB1-204ENST00000564448 KRTAP20-1Q3LI63 56 aa3.55□□□□□ -1.84
CNGB1-204ENST00000564448 PRM1P04553 51 aa3.54□□□□□ -1.84
CNGB1-204ENST00000564448 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
CNGB1-204ENST00000564448 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
CNGB1-204ENST00000564448 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
CNGB1-204ENST00000564448 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
CNGB1-204ENST00000564448 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
CNGB1-204ENST00000564448 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
CNGB1-204ENST00000564448 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
CNGB1-204ENST00000564448 MT4P47944 62 aa3.49□□□□□ -1.85
CNGB1-204ENST00000564448 SSPOA2VEC9 5147 aa3.46□□□□□ -1.86
CNGB1-204ENST00000564448 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
CNGB1-204ENST00000564448 LCE5AQ5TCM9 118 aa3.33□□□□□ -1.88
CNGB1-204ENST00000564448 MT3P25713 68 aa3.3□□□□□ -1.88
CNGB1-204ENST00000564448 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
CNGB1-204ENST00000564448 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
CNGB1-204ENST00000564448 MT1AP04731 61 aa3.24□□□□□ -1.89
CNGB1-204ENST00000564448 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
CNGB1-204ENST00000564448 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
CNGB1-204ENST00000564448 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
CNGB1-204ENST00000564448 NEBP20929 6669 aa3.15□□□□□ -1.91
CNGB1-204ENST00000564448 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
CNGB1-204ENST00000564448 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
CNGB1-204ENST00000564448 LCE1DQ5T752 114 aa3.12□□□□□ -1.91
CNGB1-204ENST00000564448 KRTAP9-4Q9BYQ2 154 aa3□□□□□ -1.93
CNGB1-204ENST00000564448 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
CNGB1-204ENST00000564448 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
CNGB1-204ENST00000564448 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
CNGB1-204ENST00000564448 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
CNGB1-204ENST00000564448 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
CNGB1-204ENST00000564448 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.98
CNGB1-204ENST00000564448 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.98
CNGB1-204ENST00000564448 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
CNGB1-204ENST00000564448 LCE1EQ5T753 118 aa2.58□□□□□ -2
CNGB1-204ENST00000564448 LCE1CQ5T751 118 aa2.54□□□□□ -2
CNGB1-204ENST00000564448 LCE1FQ5T754 118 aa2.54□□□□□ -2
CNGB1-204ENST00000564448 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
CNGB1-204ENST00000564448 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
CNGB1-204ENST00000564448 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
CNGB1-204ENST00000564448 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
CNGB1-204ENST00000564448 KRTAP4-2Q9BYR5 136 aa2.35□□□□□ -2.03
CNGB1-204ENST00000564448 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
CNGB1-204ENST00000564448 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
CNGB1-204ENST00000564448 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
CNGB1-204ENST00000564448 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
CNGB1-204ENST00000564448 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
CNGB1-204ENST00000564448 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
CNGB1-204ENST00000564448 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
CNGB1-204ENST00000564448 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
CNGB1-204ENST00000564448 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
CNGB1-204ENST00000564448 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
CNGB1-204ENST00000564448 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
CNGB1-204ENST00000564448 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
CNGB1-204ENST00000564448 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
CNGB1-204ENST00000564448 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 60.2 ms