RNA–Protein interactions for RNA: ENST00000563844.1

CASC16-202, Transcript of cancer susceptibility 16, humanhuman

TSL 3 BASIC

Gene CASC16, Length 610 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC16-202ENST00000563844 Q5VV11 94 aa1.38□□□□□ -2.19
CASC16-202ENST00000563844 SPATA8Q6RVD6 105 aa1.38□□□□□ -2.19
CASC16-202ENST00000563844 MIR22HGQ0VDD5 57 aa1.37□□□□□ -2.19
CASC16-202ENST00000563844 KRTAP4-1Q9BYQ7 146 aa1.37□□□□□ -2.19
CASC16-202ENST00000563844 FAT3Q8TDW7 4589 aa1.37□□□□□ -2.19
CASC16-202ENST00000563844 LRP1Q07954 4544 aaKnown RBP1.36□□□□□ -2.19
CASC16-202ENST00000563844 LRP2P98164 4655 aa1.36□□□□□ -2.19
CASC16-202ENST00000563844 HMCN2Q8NDA2 5059 aa1.36□□□□□ -2.19
CASC16-202ENST00000563844 A6NN06 94 aa1.36□□□□□ -2.19
CASC16-202ENST00000563844 UBR4Q5T4S7 5183 aa1.36□□□□□ -2.19
CASC16-202ENST00000563844 M0R2T5 61 aa1.32□□□□□ -2.2
CASC16-202ENST00000563844 KRTAP19-2Q3LHN2 52 aa1.31□□□□□ -2.2
CASC16-202ENST00000563844 HMCN1Q96RW7 5635 aa1.31□□□□□ -2.2
CASC16-202ENST00000563844 FCGBPQ9Y6R7 5405 aaPredicted RBP1.3□□□□□ -2.2
CASC16-202ENST00000563844 RNF213Q63HN8 5207 aa1.3□□□□□ -2.2
CASC16-202ENST00000563844 ROMO1P60602 79 aa1.29□□□□□ -2.2
CASC16-202ENST00000563844 MUC17Q685J3 4493 aa1.28□□□□□ -2.21
CASC16-202ENST00000563844 MT1HP80294 61 aa1.27□□□□□ -2.21
CASC16-202ENST00000563844 PLAC4Q8WY50 150 aa1.27□□□□□ -2.21
CASC16-202ENST00000563844 SPRR2GQ9BYE4 73 aa1.27□□□□□ -2.21
CASC16-202ENST00000563844 LPAP08519 4548 aa1.27□□□□□ -2.21
CASC16-202ENST00000563844 FAT4Q6V0I7 4981 aa1.26□□□□□ -2.21
CASC16-202ENST00000563844 A0A0D9SG42 100 aa1.25□□□□□ -2.21
CASC16-202ENST00000563844 FLGP20930 4061 aaPredicted RBP1.25□□□□□ -2.21
CASC16-202ENST00000563844 MT2AP02795 61 aa1.22□□□□□ -2.21
CASC16-202ENST00000563844 TNP1P09430 55 aa1.22□□□□□ -2.21
CASC16-202ENST00000563844 KRTAP19-8Q3LI54 63 aa1.22□□□□□ -2.21
CASC16-202ENST00000563844 MUC2Q02817 5179 aa1.21□□□□□ -2.22
CASC16-202ENST00000563844 MT1FP04733 61 aa1.19□□□□□ -2.22
CASC16-202ENST00000563844 FSIP2Q5CZC0 6907 aa1.19□□□□□ -2.22
CASC16-202ENST00000563844 C10orf95Q9H7T3 257 aa1.17□□□□□ -2.22
CASC16-202ENST00000563844 MT1BP07438 61 aa1.14□□□□□ -2.23
CASC16-202ENST00000563844 MT1XP80297 61 aa1.12□□□□□ -2.23
CASC16-202ENST00000563844 KRTAP19-6Q3LI70 58 aa1.12□□□□□ -2.23
CASC16-202ENST00000563844 KRTAP8-1Q8IUC2 63 aa1.11□□□□□ -2.23
CASC16-202ENST00000563844 KRTAP20-1Q3LI63 56 aa1.09□□□□□ -2.23
CASC16-202ENST00000563844 SSPOA2VEC9 5147 aa1.08□□□□□ -2.24
CASC16-202ENST00000563844 MACF1Q9UPN3 7388 aaKnown RBP1.08□□□□□ -2.24
CASC16-202ENST00000563844 INE1O15225 51 aa1.07□□□□□ -2.24
CASC16-202ENST00000563844 SYNE2Q8WXH0 6885 aaKnown RBP1.06□□□□□ -2.24
CASC16-202ENST00000563844 USH2AO75445 5202 aa1.05□□□□□ -2.24
CASC16-202ENST00000563844 KRTAP2-3P0C7H8 128 aa1.04□□□□□ -2.24
CASC16-202ENST00000563844 KRTAP2-4Q9BYR9 128 aa1.04□□□□□ -2.24
CASC16-202ENST00000563844 NEBP20929 6669 aa1.02□□□□□ -2.25
CASC16-202ENST00000563844 SPRR2EP22531 72 aa1.02□□□□□ -2.25
CASC16-202ENST00000563844 SPRR2BP35325 72 aa1.02□□□□□ -2.25
CASC16-202ENST00000563844 SPRR2AP35326 72 aa1.02□□□□□ -2.25
CASC16-202ENST00000563844 MT1GP13640 62 aa1.01□□□□□ -2.25
CASC16-202ENST00000563844 KRTAP19-5Q3LI72 72 aa1.01□□□□□ -2.25
CASC16-202ENST00000563844 SPRR2FQ96RM1 72 aa1.01□□□□□ -2.25
CASC16-202ENST00000563844 KRTAP2-1Q9BYU5 128 aa1□□□□□ -2.25
CASC16-202ENST00000563844 MT1EP04732 61 aa0.99□□□□□ -2.25
CASC16-202ENST00000563844 SPRR2DP22532 72 aa0.99□□□□□ -2.25
CASC16-202ENST00000563844 KRTAP19-7Q3SYF9 63 aa0.99□□□□□ -2.25
CASC16-202ENST00000563844 MT1LQ93083 61 aa0.98□□□□□ -2.25
CASC16-202ENST00000563844 KRTAP19-3Q7Z4W3 81 aa0.97□□□□□ -2.25
CASC16-202ENST00000563844 MUC12Q9UKN1 5478 aa0.95□□□□□ -2.26
CASC16-202ENST00000563844 MT1MQ8N339 61 aa0.94□□□□□ -2.26
CASC16-202ENST00000563844 MDN1Q9NU22 5596 aa0.94□□□□□ -2.26
CASC16-202ENST00000563844 KMT2DO14686 5537 aa0.93□□□□□ -2.26
CASC16-202ENST00000563844 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
CASC16-202ENST00000563844 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
CASC16-202ENST00000563844 GPR98Q8WXG9 6306 aa0.87□□□□□ -2.27
CASC16-202ENST00000563844 MT1AP04731 61 aa0.85□□□□□ -2.27
CASC16-202ENST00000563844 MT4P47944 62 aa0.85□□□□□ -2.27
CASC16-202ENST00000563844 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
CASC16-202ENST00000563844 DSTQ03001 7570 aaKnown RBP0.82□□□□□ -2.28
CASC16-202ENST00000563844 KRTAP6-1Q3LI64 71 aa0.79□□□□□ -2.28
CASC16-202ENST00000563844 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
CASC16-202ENST00000563844 AHNAKQ09666 5890 aaKnown RBP0.76□□□□□ -2.29
CASC16-202ENST00000563844 KRTAP6-2Q3LI66 62 aa0.74□□□□□ -2.29
CASC16-202ENST00000563844 MUC5ACP98088 5654 aa0.7□□□□□ -2.3
CASC16-202ENST00000563844 SYNE1Q8NF91 8797 aaKnown RBP0.67□□□□□ -2.3
CASC16-202ENST00000563844 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
CASC16-202ENST00000563844 PRM1P04553 51 aa0.61□□□□□ -2.31
CASC16-202ENST00000563844 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
CASC16-202ENST00000563844 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 88.4 ms