RNA–Protein interactions for RNA: ENST00000563594.5

DEF8-210, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene DEF8, Length 4,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-210ENST00000563594 KRTAP19-3Q7Z4W3 81 aa5.06□□□□□ -1.6
DEF8-210ENST00000563594 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
DEF8-210ENST00000563594 LCE3BQ5TA77 95 aa5□□□□□ -1.61
DEF8-210ENST00000563594 LCE2DQ5TA82 110 aaPredicted RBP4.98□□□□□ -1.61
DEF8-210ENST00000563594 USH2AO75445 5202 aa4.96□□□□□ -1.62
DEF8-210ENST00000563594 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
DEF8-210ENST00000563594 KRTAP12-4P60329 112 aa4.94□□□□□ -1.62
DEF8-210ENST00000563594 MT1MQ8N339 61 aa4.91□□□□□ -1.62
DEF8-210ENST00000563594 SPRR2DP22532 72 aa4.89□□□□□ -1.63
DEF8-210ENST00000563594 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
DEF8-210ENST00000563594 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
DEF8-210ENST00000563594 KMT2DO14686 5537 aa4.79□□□□□ -1.64
DEF8-210ENST00000563594 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
DEF8-210ENST00000563594 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
DEF8-210ENST00000563594 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
DEF8-210ENST00000563594 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
DEF8-210ENST00000563594 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
DEF8-210ENST00000563594 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
DEF8-210ENST00000563594 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
DEF8-210ENST00000563594 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
DEF8-210ENST00000563594 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
DEF8-210ENST00000563594 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
DEF8-210ENST00000563594 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
DEF8-210ENST00000563594 KRTAP9-6A0A140TA67 174 aa4.52□□□□□ -1.69
DEF8-210ENST00000563594 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
DEF8-210ENST00000563594 MT1AP04731 61 aa4.46□□□□□ -1.7
DEF8-210ENST00000563594 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
DEF8-210ENST00000563594 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
DEF8-210ENST00000563594 MT3P25713 68 aa4.38□□□□□ -1.71
DEF8-210ENST00000563594 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
DEF8-210ENST00000563594 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
DEF8-210ENST00000563594 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.36□□□□□ -1.71
DEF8-210ENST00000563594 MT4P47944 62 aa4.35□□□□□ -1.71
DEF8-210ENST00000563594 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
DEF8-210ENST00000563594 PRM1P04553 51 aa4.3□□□□□ -1.72
DEF8-210ENST00000563594 KRTAP9-7A8MTY7 169 aa4.27□□□□□ -1.73
DEF8-210ENST00000563594 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
DEF8-210ENST00000563594 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
DEF8-210ENST00000563594 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
DEF8-210ENST00000563594 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
DEF8-210ENST00000563594 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
DEF8-210ENST00000563594 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
DEF8-210ENST00000563594 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
DEF8-210ENST00000563594 MDN1Q9NU22 5596 aa4□□□□□ -1.77
DEF8-210ENST00000563594 LCE4AQ5TA78 99 aa3.96□□□□□ -1.78
DEF8-210ENST00000563594 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
DEF8-210ENST00000563594 NEBP20929 6669 aa3.8□□□□□ -1.8
DEF8-210ENST00000563594 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
DEF8-210ENST00000563594 KRTAP5-5Q701N2 237 aaPredicted RBP3.7□□□□□ -1.82
DEF8-210ENST00000563594 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
DEF8-210ENST00000563594 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
DEF8-210ENST00000563594 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
DEF8-210ENST00000563594 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
DEF8-210ENST00000563594 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
DEF8-210ENST00000563594 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
DEF8-210ENST00000563594 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
DEF8-210ENST00000563594 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
DEF8-210ENST00000563594 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
DEF8-210ENST00000563594 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
DEF8-210ENST00000563594 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
DEF8-210ENST00000563594 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
DEF8-210ENST00000563594 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
DEF8-210ENST00000563594 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
DEF8-210ENST00000563594 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
DEF8-210ENST00000563594 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
DEF8-210ENST00000563594 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
DEF8-210ENST00000563594 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
DEF8-210ENST00000563594 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
DEF8-210ENST00000563594 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
DEF8-210ENST00000563594 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
DEF8-210ENST00000563594 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
DEF8-210ENST00000563594 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
DEF8-210ENST00000563594 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
DEF8-210ENST00000563594 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
DEF8-210ENST00000563594 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
DEF8-210ENST00000563594 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
DEF8-210ENST00000563594 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms