RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
LRRC49-227ENST00000561081 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
LRRC49-227ENST00000561081 KRTAP9-2Q9BYQ4 174 aa3.55□□□□□ -1.84
LRRC49-227ENST00000561081 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
LRRC49-227ENST00000561081 MT1GP13640 62 aa3.55□□□□□ -1.84
LRRC49-227ENST00000561081 MT1MQ8N339 61 aa3.54□□□□□ -1.84
LRRC49-227ENST00000561081 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
LRRC49-227ENST00000561081 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
LRRC49-227ENST00000561081 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
LRRC49-227ENST00000561081 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
LRRC49-227ENST00000561081 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
LRRC49-227ENST00000561081 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
LRRC49-227ENST00000561081 LCE5AQ5TCM9 118 aa3.48□□□□□ -1.85
LRRC49-227ENST00000561081 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
LRRC49-227ENST00000561081 INE1O15225 51 aa3.43□□□□□ -1.86
LRRC49-227ENST00000561081 SYNE2Q8WXH0 6885 aaKnown RBP3.39□□□□□ -1.87
LRRC49-227ENST00000561081 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
LRRC49-227ENST00000561081 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
LRRC49-227ENST00000561081 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
LRRC49-227ENST00000561081 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
LRRC49-227ENST00000561081 SPRR2EP22531 72 aa3.26□□□□□ -1.89
LRRC49-227ENST00000561081 SPRR2BP35325 72 aa3.26□□□□□ -1.89
LRRC49-227ENST00000561081 SPRR2AP35326 72 aa3.26□□□□□ -1.89
LRRC49-227ENST00000561081 KRTAP9-6A0A140TA67 174 aa3.25□□□□□ -1.89
LRRC49-227ENST00000561081 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
LRRC49-227ENST00000561081 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
LRRC49-227ENST00000561081 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
LRRC49-227ENST00000561081 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
LRRC49-227ENST00000561081 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
LRRC49-227ENST00000561081 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
LRRC49-227ENST00000561081 MT1AP04731 61 aa3.15□□□□□ -1.9
LRRC49-227ENST00000561081 SPRR2DP22532 72 aa3.13□□□□□ -1.91
LRRC49-227ENST00000561081 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
LRRC49-227ENST00000561081 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
LRRC49-227ENST00000561081 LCE1DQ5T752 114 aa3.06□□□□□ -1.92
LRRC49-227ENST00000561081 KRTAP4-9Q9BYQ8 210 aa3.02□□□□□ -1.93
LRRC49-227ENST00000561081 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
LRRC49-227ENST00000561081 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
LRRC49-227ENST00000561081 NEBP20929 6669 aa2.94□□□□□ -1.94
LRRC49-227ENST00000561081 KRTAP9-7A8MTY7 169 aa2.93□□□□□ -1.94
LRRC49-227ENST00000561081 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
LRRC49-227ENST00000561081 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
LRRC49-227ENST00000561081 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
LRRC49-227ENST00000561081 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
LRRC49-227ENST00000561081 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
LRRC49-227ENST00000561081 MT3P25713 68 aa2.84□□□□□ -1.95
LRRC49-227ENST00000561081 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
LRRC49-227ENST00000561081 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
LRRC49-227ENST00000561081 MT4P47944 62 aa2.74□□□□□ -1.97
LRRC49-227ENST00000561081 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
LRRC49-227ENST00000561081 KRTAP2-2Q9BYT5 123 aa2.7□□□□□ -1.98
LRRC49-227ENST00000561081 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
LRRC49-227ENST00000561081 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
LRRC49-227ENST00000561081 PRM1P04553 51 aa2.63□□□□□ -1.99
LRRC49-227ENST00000561081 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
LRRC49-227ENST00000561081 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
LRRC49-227ENST00000561081 OBSCNQ5VST9 7968 aa2.59□□□□□ -2
LRRC49-227ENST00000561081 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
LRRC49-227ENST00000561081 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
LRRC49-227ENST00000561081 MUC5ACP98088 5654 aa2.34□□□□□ -2.03
LRRC49-227ENST00000561081 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
LRRC49-227ENST00000561081 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
LRRC49-227ENST00000561081 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.05
LRRC49-227ENST00000561081 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
LRRC49-227ENST00000561081 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
LRRC49-227ENST00000561081 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
LRRC49-227ENST00000561081 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
LRRC49-227ENST00000561081 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
LRRC49-227ENST00000561081 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
LRRC49-227ENST00000561081 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
LRRC49-227ENST00000561081 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
LRRC49-227ENST00000561081 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
LRRC49-227ENST00000561081 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
LRRC49-227ENST00000561081 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
LRRC49-227ENST00000561081 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
LRRC49-227ENST00000561081 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
LRRC49-227ENST00000561081 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
LRRC49-227ENST00000561081 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 35.1 ms