RNA–Protein interactions for RNA: ENST00000560869.5

TNFAIP2-209, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP2, Length 4,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-209ENST00000560869 SPRR2DP22532 72 aa6.76□□□□□ -1.33
TNFAIP2-209ENST00000560869 MT1LQ93083 61 aa6.67□□□□□ -1.34
TNFAIP2-209ENST00000560869 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
TNFAIP2-209ENST00000560869 MT1EP04732 61 aa6.59□□□□□ -1.35
TNFAIP2-209ENST00000560869 LCE3DQ9BYE3 92 aa6.58□□□□□ -1.36
TNFAIP2-209ENST00000560869 KRTAP19-3Q7Z4W3 81 aa6.54□□□□□ -1.36
TNFAIP2-209ENST00000560869 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
TNFAIP2-209ENST00000560869 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
TNFAIP2-209ENST00000560869 LCE3EQ5T5B0 92 aa6.47□□□□□ -1.37
TNFAIP2-209ENST00000560869 KRTAP4-3Q9BYR4 195 aa6.46□□□□□ -1.38
TNFAIP2-209ENST00000560869 KRTAP9-6A0A140TA67 174 aa6.37□□□□□ -1.39
TNFAIP2-209ENST00000560869 FCGBPQ9Y6R7 5405 aaPredicted RBP6.35□□□□□ -1.39
TNFAIP2-209ENST00000560869 MT1MQ8N339 61 aa6.34□□□□□ -1.39
TNFAIP2-209ENST00000560869 KRTAP19-7Q3SYF9 63 aa6.33□□□□□ -1.4
TNFAIP2-209ENST00000560869 DSTQ03001 7570 aaKnown RBP6.26□□□□□ -1.41
TNFAIP2-209ENST00000560869 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
TNFAIP2-209ENST00000560869 KRTAP9-6A8MVA2 160 aa6.14□□□□□ -1.43
TNFAIP2-209ENST00000560869 PRM1P04553 51 aa6.12□□□□□ -1.43
TNFAIP2-209ENST00000560869 KRTAP4-9Q9BYQ8 210 aa6.11□□□□□ -1.43
TNFAIP2-209ENST00000560869 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
TNFAIP2-209ENST00000560869 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
TNFAIP2-209ENST00000560869 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
TNFAIP2-209ENST00000560869 MT4P47944 62 aa6.05□□□□□ -1.44
TNFAIP2-209ENST00000560869 USH2AO75445 5202 aa6.04□□□□□ -1.44
TNFAIP2-209ENST00000560869 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
TNFAIP2-209ENST00000560869 KMT2DO14686 5537 aa5.98□□□□□ -1.45
TNFAIP2-209ENST00000560869 MT3P25713 68 aa5.95□□□□□ -1.46
TNFAIP2-209ENST00000560869 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
TNFAIP2-209ENST00000560869 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
TNFAIP2-209ENST00000560869 MT1AP04731 61 aa5.81□□□□□ -1.48
TNFAIP2-209ENST00000560869 LCE1AQ5T7P2 110 aa5.77□□□□□ -1.49
TNFAIP2-209ENST00000560869 KRTAP20-1Q3LI63 56 aa5.74□□□□□ -1.49
TNFAIP2-209ENST00000560869 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
TNFAIP2-209ENST00000560869 LCE1BQ5T7P3 118 aa5.68□□□□□ -1.5
TNFAIP2-209ENST00000560869 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
TNFAIP2-209ENST00000560869 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.51
TNFAIP2-209ENST00000560869 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
TNFAIP2-209ENST00000560869 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.51
TNFAIP2-209ENST00000560869 SSPOA2VEC9 5147 aa5.52□□□□□ -1.53
TNFAIP2-209ENST00000560869 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
TNFAIP2-209ENST00000560869 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
TNFAIP2-209ENST00000560869 MUC19Q7Z5P9 8384 aa5.37□□□□□ -1.55
TNFAIP2-209ENST00000560869 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
TNFAIP2-209ENST00000560869 MDN1Q9NU22 5596 aa5.32□□□□□ -1.56
TNFAIP2-209ENST00000560869 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
TNFAIP2-209ENST00000560869 KRTAP5-9P26371 169 aa5.2□□□□□ -1.58
TNFAIP2-209ENST00000560869 NEBP20929 6669 aa5.19□□□□□ -1.58
TNFAIP2-209ENST00000560869 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
TNFAIP2-209ENST00000560869 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
TNFAIP2-209ENST00000560869 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
TNFAIP2-209ENST00000560869 KRTAP4-11Q9BYQ6 195 aa4.61□□□□□ -1.67
TNFAIP2-209ENST00000560869 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
TNFAIP2-209ENST00000560869 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
TNFAIP2-209ENST00000560869 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
TNFAIP2-209ENST00000560869 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
TNFAIP2-209ENST00000560869 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
TNFAIP2-209ENST00000560869 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
TNFAIP2-209ENST00000560869 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
TNFAIP2-209ENST00000560869 KRTAP4-4Q9BYR3 166 aa4.21□□□□□ -1.73
TNFAIP2-209ENST00000560869 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
TNFAIP2-209ENST00000560869 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
TNFAIP2-209ENST00000560869 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
TNFAIP2-209ENST00000560869 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
TNFAIP2-209ENST00000560869 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
TNFAIP2-209ENST00000560869 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
TNFAIP2-209ENST00000560869 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.84
TNFAIP2-209ENST00000560869 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
TNFAIP2-209ENST00000560869 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
TNFAIP2-209ENST00000560869 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
TNFAIP2-209ENST00000560869 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
TNFAIP2-209ENST00000560869 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
TNFAIP2-209ENST00000560869 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
TNFAIP2-209ENST00000560869 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
TNFAIP2-209ENST00000560869 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
TNFAIP2-209ENST00000560869 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
TNFAIP2-209ENST00000560869 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
TNFAIP2-209ENST00000560869 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms