RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 KRTAP4-8Q9BYQ9 185 aa3.54□□□□□ -1.84
SEMA4B-204ENST00000558065 USH2AO75445 5202 aa3.52□□□□□ -1.85
SEMA4B-204ENST00000558065 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
SEMA4B-204ENST00000558065 PRM1P04553 51 aa3.46□□□□□ -1.86
SEMA4B-204ENST00000558065 KRTAP9-2Q9BYQ4 174 aa3.46□□□□□ -1.86
SEMA4B-204ENST00000558065 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
SEMA4B-204ENST00000558065 KMT2DO14686 5537 aa3.44□□□□□ -1.86
SEMA4B-204ENST00000558065 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
SEMA4B-204ENST00000558065 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
SEMA4B-204ENST00000558065 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
SEMA4B-204ENST00000558065 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.88
SEMA4B-204ENST00000558065 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
SEMA4B-204ENST00000558065 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
SEMA4B-204ENST00000558065 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
SEMA4B-204ENST00000558065 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SEMA4B-204ENST00000558065 LOC100996750A0A140TA64 210 aa3.28□□□□□ -1.88
SEMA4B-204ENST00000558065 MT1GP13640 62 aa3.27□□□□□ -1.89
SEMA4B-204ENST00000558065 MT1LQ93083 61 aa3.26□□□□□ -1.89
SEMA4B-204ENST00000558065 FCGBPQ9Y6R7 5405 aaPredicted RBP3.25□□□□□ -1.89
SEMA4B-204ENST00000558065 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
SEMA4B-204ENST00000558065 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
SEMA4B-204ENST00000558065 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
SEMA4B-204ENST00000558065 MT1EP04732 61 aa3.2□□□□□ -1.9
SEMA4B-204ENST00000558065 MT1AP04731 61 aa3.16□□□□□ -1.9
SEMA4B-204ENST00000558065 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
SEMA4B-204ENST00000558065 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
SEMA4B-204ENST00000558065 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
SEMA4B-204ENST00000558065 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
SEMA4B-204ENST00000558065 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
SEMA4B-204ENST00000558065 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.92
SEMA4B-204ENST00000558065 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
SEMA4B-204ENST00000558065 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
SEMA4B-204ENST00000558065 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
SEMA4B-204ENST00000558065 SPRR2EP22531 72 aa3.03□□□□□ -1.92
SEMA4B-204ENST00000558065 SPRR2BP35325 72 aa3.03□□□□□ -1.92
SEMA4B-204ENST00000558065 SPRR2AP35326 72 aa3.03□□□□□ -1.92
SEMA4B-204ENST00000558065 MT1MQ8N339 61 aa3.02□□□□□ -1.93
SEMA4B-204ENST00000558065 MACF1Q9UPN3 7388 aaKnown RBP2.97□□□□□ -1.93
SEMA4B-204ENST00000558065 SPRR2DP22532 72 aa2.9□□□□□ -1.95
SEMA4B-204ENST00000558065 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
SEMA4B-204ENST00000558065 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
SEMA4B-204ENST00000558065 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
SEMA4B-204ENST00000558065 KRTAP9-4Q9BYQ2 154 aa2.71□□□□□ -1.98
SEMA4B-204ENST00000558065 MT4P47944 62 aa2.68□□□□□ -1.98
SEMA4B-204ENST00000558065 MT3P25713 68 aa2.64□□□□□ -1.99
SEMA4B-204ENST00000558065 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.61□□□□□ -1.99
SEMA4B-204ENST00000558065 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
SEMA4B-204ENST00000558065 KRTAP4-11Q9BYQ6 195 aa2.55□□□□□ -2
SEMA4B-204ENST00000558065 LCE4AQ5TA78 99 aa2.54□□□□□ -2
SEMA4B-204ENST00000558065 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
SEMA4B-204ENST00000558065 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
SEMA4B-204ENST00000558065 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
SEMA4B-204ENST00000558065 NEBP20929 6669 aa2.39□□□□□ -2.03
SEMA4B-204ENST00000558065 KRTAP20-1Q3LI63 56 aa2.38□□□□□ -2.03
SEMA4B-204ENST00000558065 KRTAP4-6Q9BYQ5 205 aa2.37□□□□□ -2.03
SEMA4B-204ENST00000558065 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
SEMA4B-204ENST00000558065 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
SEMA4B-204ENST00000558065 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
SEMA4B-204ENST00000558065 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
SEMA4B-204ENST00000558065 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
SEMA4B-204ENST00000558065 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
SEMA4B-204ENST00000558065 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
SEMA4B-204ENST00000558065 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.08
SEMA4B-204ENST00000558065 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
SEMA4B-204ENST00000558065 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
SEMA4B-204ENST00000558065 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
SEMA4B-204ENST00000558065 KRTAP4-2Q9BYR5 136 aa1.87□□□□□ -2.11
SEMA4B-204ENST00000558065 KRTAP5-3Q6L8H2 238 aa1.86□□□□□ -2.11
SEMA4B-204ENST00000558065 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
SEMA4B-204ENST00000558065 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
SEMA4B-204ENST00000558065 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
SEMA4B-204ENST00000558065 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
SEMA4B-204ENST00000558065 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
SEMA4B-204ENST00000558065 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
SEMA4B-204ENST00000558065 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
SEMA4B-204ENST00000558065 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
SEMA4B-204ENST00000558065 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
SEMA4B-204ENST00000558065 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms