RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
GPHN-215ENST00000557654 RYR2Q92736 4967 aa1.6□□□□□ -2.15
GPHN-215ENST00000557654 INE1O15225 51 aa1.59□□□□□ -2.15
GPHN-215ENST00000557654 TNP1P09430 55 aa1.59□□□□□ -2.15
GPHN-215ENST00000557654 Q5VSD8 79 aa1.59□□□□□ -2.15
GPHN-215ENST00000557654 MUC17Q685J3 4493 aa1.59□□□□□ -2.15
GPHN-215ENST00000557654 RYR1P21817 5038 aa1.58□□□□□ -2.16
GPHN-215ENST00000557654 LPAP08519 4548 aa1.58□□□□□ -2.16
GPHN-215ENST00000557654 LRP2P98164 4655 aa1.57□□□□□ -2.16
GPHN-215ENST00000557654 KMT2CQ8NEZ4 4911 aaKnown RBP1.56□□□□□ -2.16
GPHN-215ENST00000557654 KRTAP19-2Q3LHN2 52 aa1.56□□□□□ -2.16
GPHN-215ENST00000557654 KRTAP21-3Q3LHN1 58 aa1.55□□□□□ -2.16
GPHN-215ENST00000557654 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
GPHN-215ENST00000557654 RYR3Q15413 4870 aa1.49□□□□□ -2.17
GPHN-215ENST00000557654 KRTAP8-1Q8IUC2 63 aa1.49□□□□□ -2.17
GPHN-215ENST00000557654 SPRR2GQ9BYE4 73 aa1.48□□□□□ -2.17
GPHN-215ENST00000557654 KIAA1109Q2LD37 5005 aa1.46□□□□□ -2.18
GPHN-215ENST00000557654 BIRC6Q9NR09 4857 aa1.45□□□□□ -2.18
GPHN-215ENST00000557654 HMCN1Q96RW7 5635 aa1.45□□□□□ -2.18
GPHN-215ENST00000557654 HERC2O95714 4834 aa1.42□□□□□ -2.18
GPHN-215ENST00000557654 ABCA13Q86UQ4 5058 aa1.4□□□□□ -2.19
GPHN-215ENST00000557654 KRTAP19-8Q3LI54 63 aa1.4□□□□□ -2.19
GPHN-215ENST00000557654 HMCN2Q8NDA2 5059 aa1.36□□□□□ -2.19
GPHN-215ENST00000557654 MT1XP80297 61 aa1.36□□□□□ -2.19
GPHN-215ENST00000557654 MT2AP02795 61 aa1.35□□□□□ -2.19
GPHN-215ENST00000557654 MT1BP07438 61 aa1.35□□□□□ -2.19
GPHN-215ENST00000557654 PCLOQ9Y6V0 5065 aa1.35□□□□□ -2.19
GPHN-215ENST00000557654 EPPK1P58107 5090 aaKnown RBP1.34□□□□□ -2.19
GPHN-215ENST00000557654 MT1FP04733 61 aa1.34□□□□□ -2.19
GPHN-215ENST00000557654 KRTAP2-3P0C7H8 128 aa1.34□□□□□ -2.19
GPHN-215ENST00000557654 KRTAP2-4Q9BYR9 128 aa1.34□□□□□ -2.19
GPHN-215ENST00000557654 KRTAP2-1Q9BYU5 128 aa1.34□□□□□ -2.19
GPHN-215ENST00000557654 MT1HP80294 61 aa1.32□□□□□ -2.2
GPHN-215ENST00000557654 UBR4Q5T4S7 5183 aa1.3□□□□□ -2.2
GPHN-215ENST00000557654 KRTAP19-5Q3LI72 72 aa1.29□□□□□ -2.2
GPHN-215ENST00000557654 M0R2T5 61 aa1.28□□□□□ -2.2
GPHN-215ENST00000557654 FAT4Q6V0I7 4981 aa1.27□□□□□ -2.21
GPHN-215ENST00000557654 MUC2Q02817 5179 aa1.26□□□□□ -2.21
GPHN-215ENST00000557654 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
GPHN-215ENST00000557654 RNF213Q63HN8 5207 aa1.22□□□□□ -2.21
GPHN-215ENST00000557654 MT1LQ93083 61 aa1.2□□□□□ -2.22
GPHN-215ENST00000557654 MT1EP04732 61 aa1.19□□□□□ -2.22
GPHN-215ENST00000557654 GPR98Q8WXG9 6306 aa1.16□□□□□ -2.22
GPHN-215ENST00000557654 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
GPHN-215ENST00000557654 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
GPHN-215ENST00000557654 MT1AP04731 61 aa1.11□□□□□ -2.23
GPHN-215ENST00000557654 MT1GP13640 62 aa1.09□□□□□ -2.23
GPHN-215ENST00000557654 MT1MQ8N339 61 aa1.09□□□□□ -2.23
GPHN-215ENST00000557654 KMT2DO14686 5537 aa1.08□□□□□ -2.24
GPHN-215ENST00000557654 SSPOA2VEC9 5147 aa1.07□□□□□ -2.24
GPHN-215ENST00000557654 KRTAP19-3Q7Z4W3 81 aa1.07□□□□□ -2.24
GPHN-215ENST00000557654 USH2AO75445 5202 aa1.07□□□□□ -2.24
GPHN-215ENST00000557654 KRTAP19-6Q3LI70 58 aa1.06□□□□□ -2.24
GPHN-215ENST00000557654 PRM1P04553 51 aa1.04□□□□□ -2.24
GPHN-215ENST00000557654 SYNE1Q8NF91 8797 aaKnown RBP1.01□□□□□ -2.25
GPHN-215ENST00000557654 SPRR2FQ96RM1 72 aa1.01□□□□□ -2.25
GPHN-215ENST00000557654 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
GPHN-215ENST00000557654 KRTAP6-2Q3LI66 62 aa0.97□□□□□ -2.25
GPHN-215ENST00000557654 SPRR2AP35326 72 aa0.94□□□□□ -2.26
GPHN-215ENST00000557654 MUC12Q9UKN1 5478 aa0.93□□□□□ -2.26
GPHN-215ENST00000557654 SPRR2EP22531 72 aa0.91□□□□□ -2.26
GPHN-215ENST00000557654 SPRR2BP35325 72 aa0.9□□□□□ -2.27
GPHN-215ENST00000557654 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.27
GPHN-215ENST00000557654 MACF1Q9UPN3 7388 aaKnown RBP0.87□□□□□ -2.27
GPHN-215ENST00000557654 SPRR2DP22532 72 aa0.86□□□□□ -2.27
GPHN-215ENST00000557654 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
GPHN-215ENST00000557654 MDN1Q9NU22 5596 aa0.83□□□□□ -2.28
GPHN-215ENST00000557654 DSTQ03001 7570 aaKnown RBP0.78□□□□□ -2.28
GPHN-215ENST00000557654 FSIP2Q5CZC0 6907 aa0.77□□□□□ -2.29
GPHN-215ENST00000557654 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
GPHN-215ENST00000557654 SYNE2Q8WXH0 6885 aaKnown RBP0.75□□□□□ -2.29
GPHN-215ENST00000557654 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
GPHN-215ENST00000557654 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
GPHN-215ENST00000557654 KRTAP20-2Q3LI61 65 aa0.71□□□□□ -2.3
GPHN-215ENST00000557654 KRTAP20-1Q3LI63 56 aa0.66□□□□□ -2.3
GPHN-215ENST00000557654 MT4P47944 62 aa0.64□□□□□ -2.31
GPHN-215ENST00000557654 NEBP20929 6669 aa0.62□□□□□ -2.31
GPHN-215ENST00000557654 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 97.5 ms