RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 MT1EP04732 61 aa5.27□□□□□ -1.57
TMEM55B-207ENST00000557041 MT1LQ93083 61 aa5.27□□□□□ -1.57
TMEM55B-207ENST00000557041 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
TMEM55B-207ENST00000557041 INE1O15225 51 aa5.22□□□□□ -1.57
TMEM55B-207ENST00000557041 MT1GP13640 62 aa5.22□□□□□ -1.57
TMEM55B-207ENST00000557041 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.58
TMEM55B-207ENST00000557041 KRTAP19-6Q3LI70 58 aa5.17□□□□□ -1.58
TMEM55B-207ENST00000557041 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
TMEM55B-207ENST00000557041 SYNE2Q8WXH0 6885 aaKnown RBP5.14□□□□□ -1.59
TMEM55B-207ENST00000557041 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
TMEM55B-207ENST00000557041 LCE2DQ5TA82 110 aaPredicted RBP5□□□□□ -1.61
TMEM55B-207ENST00000557041 MT1MQ8N339 61 aa4.98□□□□□ -1.61
TMEM55B-207ENST00000557041 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
TMEM55B-207ENST00000557041 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
TMEM55B-207ENST00000557041 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
TMEM55B-207ENST00000557041 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
TMEM55B-207ENST00000557041 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
TMEM55B-207ENST00000557041 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
TMEM55B-207ENST00000557041 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
TMEM55B-207ENST00000557041 SPRR2EP22531 72 aa4.77□□□□□ -1.65
TMEM55B-207ENST00000557041 SPRR2BP35325 72 aa4.77□□□□□ -1.65
TMEM55B-207ENST00000557041 SPRR2AP35326 72 aa4.77□□□□□ -1.65
TMEM55B-207ENST00000557041 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
TMEM55B-207ENST00000557041 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
TMEM55B-207ENST00000557041 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
TMEM55B-207ENST00000557041 KRTAP9-6A0A140TA67 174 aa4.56□□□□□ -1.68
TMEM55B-207ENST00000557041 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
TMEM55B-207ENST00000557041 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
TMEM55B-207ENST00000557041 SPRR2DP22532 72 aa4.54□□□□□ -1.68
TMEM55B-207ENST00000557041 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
TMEM55B-207ENST00000557041 MT1AP04731 61 aa4.38□□□□□ -1.71
TMEM55B-207ENST00000557041 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.36□□□□□ -1.71
TMEM55B-207ENST00000557041 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
TMEM55B-207ENST00000557041 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
TMEM55B-207ENST00000557041 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
TMEM55B-207ENST00000557041 MT4P47944 62 aa4.2□□□□□ -1.74
TMEM55B-207ENST00000557041 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
TMEM55B-207ENST00000557041 PRM1P04553 51 aa4.17□□□□□ -1.74
TMEM55B-207ENST00000557041 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
TMEM55B-207ENST00000557041 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
TMEM55B-207ENST00000557041 MT3P25713 68 aa4.11□□□□□ -1.75
TMEM55B-207ENST00000557041 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
TMEM55B-207ENST00000557041 NEBP20929 6669 aa3.96□□□□□ -1.77
TMEM55B-207ENST00000557041 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
TMEM55B-207ENST00000557041 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
TMEM55B-207ENST00000557041 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
TMEM55B-207ENST00000557041 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
TMEM55B-207ENST00000557041 KRTAP20-1Q3LI63 56 aa3.7□□□□□ -1.82
TMEM55B-207ENST00000557041 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
TMEM55B-207ENST00000557041 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
TMEM55B-207ENST00000557041 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
TMEM55B-207ENST00000557041 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
TMEM55B-207ENST00000557041 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
TMEM55B-207ENST00000557041 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
TMEM55B-207ENST00000557041 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
TMEM55B-207ENST00000557041 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
TMEM55B-207ENST00000557041 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
TMEM55B-207ENST00000557041 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
TMEM55B-207ENST00000557041 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
TMEM55B-207ENST00000557041 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
TMEM55B-207ENST00000557041 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
TMEM55B-207ENST00000557041 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
TMEM55B-207ENST00000557041 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
TMEM55B-207ENST00000557041 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
TMEM55B-207ENST00000557041 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.93
TMEM55B-207ENST00000557041 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
TMEM55B-207ENST00000557041 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
TMEM55B-207ENST00000557041 KRTAP5-8O75690 187 aa2.84□□□□□ -1.96
TMEM55B-207ENST00000557041 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
TMEM55B-207ENST00000557041 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
TMEM55B-207ENST00000557041 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
TMEM55B-207ENST00000557041 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
TMEM55B-207ENST00000557041 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
TMEM55B-207ENST00000557041 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
TMEM55B-207ENST00000557041 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
TMEM55B-207ENST00000557041 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
TMEM55B-207ENST00000557041 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
TMEM55B-207ENST00000557041 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 96 ms