RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 RYR1P21817 5038 aa2.01□□□□□ -2.09
PCNX1-214ENST00000556849 KMT2CQ8NEZ4 4911 aaKnown RBP2.01□□□□□ -2.09
PCNX1-214ENST00000556849 KRTAP2-3P0C7H8 128 aa2□□□□□ -2.09
PCNX1-214ENST00000556849 KRTAP2-4Q9BYR9 128 aa2□□□□□ -2.09
PCNX1-214ENST00000556849 KRTAP2-1Q9BYU5 128 aa2□□□□□ -2.09
PCNX1-214ENST00000556849 KRTAP19-8Q3LI54 63 aa1.97□□□□□ -2.09
PCNX1-214ENST00000556849 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
PCNX1-214ENST00000556849 KRTAP21-3Q3LHN1 58 aa1.93□□□□□ -2.1
PCNX1-214ENST00000556849 RYR3Q15413 4870 aa1.91□□□□□ -2.1
PCNX1-214ENST00000556849 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
PCNX1-214ENST00000556849 MT1XP80297 61 aa1.9□□□□□ -2.11
PCNX1-214ENST00000556849 KRTAP6-3Q3LI67 103 aa1.9□□□□□ -2.11
PCNX1-214ENST00000556849 M0R2T5 61 aa1.86□□□□□ -2.11
PCNX1-214ENST00000556849 MT1BP07438 61 aa1.86□□□□□ -2.11
PCNX1-214ENST00000556849 KRTAP19-5Q3LI72 72 aa1.85□□□□□ -2.11
PCNX1-214ENST00000556849 MT2AP02795 61 aa1.83□□□□□ -2.12
PCNX1-214ENST00000556849 BIRC6Q9NR09 4857 aa1.82□□□□□ -2.12
PCNX1-214ENST00000556849 HERC2O95714 4834 aa1.82□□□□□ -2.12
PCNX1-214ENST00000556849 MT1FP04733 61 aa1.81□□□□□ -2.12
PCNX1-214ENST00000556849 HMCN2Q8NDA2 5059 aa1.79□□□□□ -2.12
PCNX1-214ENST00000556849 ABCA13Q86UQ4 5058 aa1.78□□□□□ -2.12
PCNX1-214ENST00000556849 KIAA1109Q2LD37 5005 aa1.78□□□□□ -2.12
PCNX1-214ENST00000556849 MT1HP80294 61 aa1.77□□□□□ -2.13
PCNX1-214ENST00000556849 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
PCNX1-214ENST00000556849 MT1EP04732 61 aa1.72□□□□□ -2.13
PCNX1-214ENST00000556849 PCLOQ9Y6V0 5065 aa1.71□□□□□ -2.14
PCNX1-214ENST00000556849 KRTAP19-7Q3SYF9 63 aa1.7□□□□□ -2.14
PCNX1-214ENST00000556849 MUC2Q02817 5179 aa1.7□□□□□ -2.14
PCNX1-214ENST00000556849 MT1LQ93083 61 aa1.69□□□□□ -2.14
PCNX1-214ENST00000556849 UBR4Q5T4S7 5183 aa1.66□□□□□ -2.14
PCNX1-214ENST00000556849 MT1AP04731 61 aa1.66□□□□□ -2.14
PCNX1-214ENST00000556849 EPPK1P58107 5090 aaKnown RBP1.64□□□□□ -2.15
PCNX1-214ENST00000556849 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
PCNX1-214ENST00000556849 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
PCNX1-214ENST00000556849 PRM1P04553 51 aa1.55□□□□□ -2.16
PCNX1-214ENST00000556849 LCE1CQ5T751 118 aa1.54□□□□□ -2.16
PCNX1-214ENST00000556849 LCE1BQ5T7P3 118 aa1.54□□□□□ -2.16
PCNX1-214ENST00000556849 MT1GP13640 62 aa1.53□□□□□ -2.16
PCNX1-214ENST00000556849 FAT4Q6V0I7 4981 aa1.53□□□□□ -2.16
PCNX1-214ENST00000556849 MT1MQ8N339 61 aa1.51□□□□□ -2.17
PCNX1-214ENST00000556849 RNF213Q63HN8 5207 aa1.5□□□□□ -2.17
PCNX1-214ENST00000556849 KRTAP19-3Q7Z4W3 81 aa1.48□□□□□ -2.17
PCNX1-214ENST00000556849 SPRR2FQ96RM1 72 aa1.47□□□□□ -2.17
PCNX1-214ENST00000556849 KRTAP6-2Q3LI66 62 aa1.43□□□□□ -2.18
PCNX1-214ENST00000556849 SYNE1Q8NF91 8797 aaKnown RBP1.42□□□□□ -2.18
PCNX1-214ENST00000556849 SPRR2AP35326 72 aa1.41□□□□□ -2.18
PCNX1-214ENST00000556849 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
PCNX1-214ENST00000556849 KRTAP6-1Q3LI64 71 aa1.39□□□□□ -2.19
PCNX1-214ENST00000556849 KRTAP19-6Q3LI70 58 aa1.38□□□□□ -2.19
PCNX1-214ENST00000556849 KMT2DO14686 5537 aa1.38□□□□□ -2.19
PCNX1-214ENST00000556849 CRCT1Q9UGL9 99 aa1.37□□□□□ -2.19
PCNX1-214ENST00000556849 SPRR2BP35325 72 aa1.36□□□□□ -2.19
PCNX1-214ENST00000556849 SSPOA2VEC9 5147 aa1.36□□□□□ -2.19
PCNX1-214ENST00000556849 SPRR2EP22531 72 aa1.35□□□□□ -2.19
PCNX1-214ENST00000556849 USH2AO75445 5202 aa1.35□□□□□ -2.19
PCNX1-214ENST00000556849 SPRR2DP22532 72 aa1.3□□□□□ -2.2
PCNX1-214ENST00000556849 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
PCNX1-214ENST00000556849 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
PCNX1-214ENST00000556849 MUC12Q9UKN1 5478 aa1.15□□□□□ -2.22
PCNX1-214ENST00000556849 FCGBPQ9Y6R7 5405 aaPredicted RBP1.15□□□□□ -2.23
PCNX1-214ENST00000556849 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
PCNX1-214ENST00000556849 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
PCNX1-214ENST00000556849 GPR98Q8WXG9 6306 aa1.1□□□□□ -2.23
PCNX1-214ENST00000556849 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
PCNX1-214ENST00000556849 FSIP2Q5CZC0 6907 aa1.04□□□□□ -2.24
PCNX1-214ENST00000556849 DSTQ03001 7570 aaKnown RBP1.04□□□□□ -2.24
PCNX1-214ENST00000556849 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
PCNX1-214ENST00000556849 NEBP20929 6669 aa1.01□□□□□ -2.25
PCNX1-214ENST00000556849 SYNE2Q8WXH0 6885 aaKnown RBP0.97□□□□□ -2.25
PCNX1-214ENST00000556849 KRTAP20-2Q3LI61 65 aa0.93□□□□□ -2.26
PCNX1-214ENST00000556849 MACF1Q9UPN3 7388 aaKnown RBP0.92□□□□□ -2.26
PCNX1-214ENST00000556849 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.27
PCNX1-214ENST00000556849 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
PCNX1-214ENST00000556849 MUC5BQ9HC84 5762 aaPredicted RBP0.87□□□□□ -2.27
PCNX1-214ENST00000556849 KRTAP20-1Q3LI63 56 aa0.84□□□□□ -2.27
PCNX1-214ENST00000556849 MT4P47944 62 aa0.79□□□□□ -2.28
PCNX1-214ENST00000556849 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
PCNX1-214ENST00000556849 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 32.4 ms