RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
MARK3-210ENST00000556463 RNF213Q63HN8 5207 aa3.16□□□□□ -1.9
MARK3-210ENST00000556463 LCE3BQ5TA77 95 aa3.13□□□□□ -1.91
MARK3-210ENST00000556463 KRTAP2-3P0C7H8 128 aa3.08□□□□□ -1.92
MARK3-210ENST00000556463 KRTAP2-4Q9BYR9 128 aa3.08□□□□□ -1.92
MARK3-210ENST00000556463 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
MARK3-210ENST00000556463 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
MARK3-210ENST00000556463 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
MARK3-210ENST00000556463 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
MARK3-210ENST00000556463 CRCT1Q9UGL9 99 aa3.07□□□□□ -1.92
MARK3-210ENST00000556463 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
MARK3-210ENST00000556463 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
MARK3-210ENST00000556463 LCE1EQ5T753 118 aa3□□□□□ -1.93
MARK3-210ENST00000556463 KRTAP4-7Q9BYR0 210 aa2.99□□□□□ -1.93
MARK3-210ENST00000556463 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
MARK3-210ENST00000556463 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
MARK3-210ENST00000556463 KMT2DO14686 5537 aa2.94□□□□□ -1.94
MARK3-210ENST00000556463 KRTAP4-8A0A0G2JLE6 195 aa2.92□□□□□ -1.94
MARK3-210ENST00000556463 LCE1DQ5T752 114 aa2.92□□□□□ -1.94
MARK3-210ENST00000556463 MT1LQ93083 61 aa2.87□□□□□ -1.95
MARK3-210ENST00000556463 MT1EP04732 61 aa2.84□□□□□ -1.95
MARK3-210ENST00000556463 USH2AO75445 5202 aa2.83□□□□□ -1.96
MARK3-210ENST00000556463 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
MARK3-210ENST00000556463 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
MARK3-210ENST00000556463 DSTQ03001 7570 aaKnown RBP2.8□□□□□ -1.96
MARK3-210ENST00000556463 KRTAP6-3Q3LI67 103 aa2.79□□□□□ -1.96
MARK3-210ENST00000556463 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
MARK3-210ENST00000556463 FSIP2Q5CZC0 6907 aa2.75□□□□□ -1.97
MARK3-210ENST00000556463 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
MARK3-210ENST00000556463 MT1GP13640 62 aa2.71□□□□□ -1.98
MARK3-210ENST00000556463 PRM1P04553 51 aa2.7□□□□□ -1.98
MARK3-210ENST00000556463 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
MARK3-210ENST00000556463 KRTAP4-3Q9BYR4 195 aa2.67□□□□□ -1.98
MARK3-210ENST00000556463 MT1MQ8N339 61 aa2.62□□□□□ -1.99
MARK3-210ENST00000556463 KRTAP19-6Q3LI70 58 aa2.62□□□□□ -1.99
MARK3-210ENST00000556463 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
MARK3-210ENST00000556463 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
MARK3-210ENST00000556463 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
MARK3-210ENST00000556463 MT1AP04731 61 aa2.57□□□□□ -2
MARK3-210ENST00000556463 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
MARK3-210ENST00000556463 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
MARK3-210ENST00000556463 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
MARK3-210ENST00000556463 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
MARK3-210ENST00000556463 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
MARK3-210ENST00000556463 KRTAP5-9P26371 169 aa2.38□□□□□ -2.03
MARK3-210ENST00000556463 SPRR2FQ96RM1 72 aa2.29□□□□□ -2.04
MARK3-210ENST00000556463 MACF1Q9UPN3 7388 aaKnown RBP2.24□□□□□ -2.05
MARK3-210ENST00000556463 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
MARK3-210ENST00000556463 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
MARK3-210ENST00000556463 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
MARK3-210ENST00000556463 KRTAP20-1Q3LI63 56 aa2.14□□□□□ -2.07
MARK3-210ENST00000556463 SPRR2AP35326 72 aa2.11□□□□□ -2.07
MARK3-210ENST00000556463 NEBP20929 6669 aa2.07□□□□□ -2.08
MARK3-210ENST00000556463 SPRR2EP22531 72 aa2.06□□□□□ -2.08
MARK3-210ENST00000556463 SPRR2BP35325 72 aa2.02□□□□□ -2.09
MARK3-210ENST00000556463 KRTAP5-4Q6L8H1 288 aa2□□□□□ -2.09
MARK3-210ENST00000556463 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
MARK3-210ENST00000556463 SPRR2DP22532 72 aa1.93□□□□□ -2.1
MARK3-210ENST00000556463 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
MARK3-210ENST00000556463 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.1
MARK3-210ENST00000556463 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
MARK3-210ENST00000556463 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
MARK3-210ENST00000556463 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.12
MARK3-210ENST00000556463 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
MARK3-210ENST00000556463 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
MARK3-210ENST00000556463 KRTAP5-1Q6L8H4 278 aa1.81□□□□□ -2.12
MARK3-210ENST00000556463 KRTAP20-2Q3LI61 65 aa1.8□□□□□ -2.12
MARK3-210ENST00000556463 MT4P47944 62 aa1.77□□□□□ -2.13
MARK3-210ENST00000556463 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
MARK3-210ENST00000556463 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
MARK3-210ENST00000556463 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
MARK3-210ENST00000556463 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
MARK3-210ENST00000556463 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
MARK3-210ENST00000556463 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
MARK3-210ENST00000556463 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
MARK3-210ENST00000556463 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
MARK3-210ENST00000556463 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
MARK3-210ENST00000556463 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms