RNA–Protein interactions for RNA: ENST00000556431.1

SIVA1-208, Transcript of SIVA1 apoptosis inducing factor, human

TSL 2

Gene SIVA1, Length 4,142 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIVA1-208	ENST00000556431	KRTAP12-4	P60329	112 aa		3.85	□□□□□ -1.79
SIVA1-208	ENST00000556431	KRTAP19-6	Q3LI70	58 aa		3.84	□□□□□ -1.79
SIVA1-208	ENST00000556431	KRTAP2-3	P0C7H8	128 aa		3.81	□□□□□ -1.8
SIVA1-208	ENST00000556431	KRTAP2-4	Q9BYR9	128 aa		3.81	□□□□□ -1.8
SIVA1-208	ENST00000556431	KRTAP2-1	Q9BYU5	128 aa		3.81	□□□□□ -1.8
SIVA1-208	ENST00000556431	KRTAP19-7	Q3SYF9	63 aa		3.8	□□□□□ -1.8
SIVA1-208	ENST00000556431	KRTAP19-3	Q7Z4W3	81 aa		3.77	□□□□□ -1.81
SIVA1-208	ENST00000556431	USH2A	O75445	5202 aa		3.77	□□□□□ -1.81
SIVA1-208	ENST00000556431	SPRR2E	P22531	72 aa		3.73	□□□□□ -1.81
SIVA1-208	ENST00000556431	SPRR2B	P35325	72 aa		3.73	□□□□□ -1.81
SIVA1-208	ENST00000556431	SPRR2A	P35326	72 aa		3.73	□□□□□ -1.81
SIVA1-208	ENST00000556431	LCE3B	Q5TA77	95 aa		3.69	□□□□□ -1.82
SIVA1-208	ENST00000556431	KRTAP4-3	Q9BYR4	195 aa		3.68	□□□□□ -1.82
SIVA1-208	ENST00000556431	MT1M	Q8N339	61 aa		3.68	□□□□□ -1.82
SIVA1-208	ENST00000556431	LOC100996750	A0A140TA64	210 aa		3.64	□□□□□ -1.83
SIVA1-208	ENST00000556431	KRTAP9-2	Q9BYQ4	174 aa		3.62	□□□□□ -1.83
SIVA1-208	ENST00000556431	SPRR2D	P22532	72 aa		3.59	□□□□□ -1.84
SIVA1-208	ENST00000556431	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.57	□□□□□ -1.84
SIVA1-208	ENST00000556431	DST	Q03001	7570 aa	Known RBP	3.56	□□□□□ -1.84
SIVA1-208	ENST00000556431	KRTAP4-9	Q9BYQ8	210 aa		3.49	□□□□□ -1.85
SIVA1-208	ENST00000556431	SSPO	A2VEC9	5147 aa		3.47	□□□□□ -1.85
SIVA1-208	ENST00000556431	LCE3D	Q9BYE3	92 aa		3.44	□□□□□ -1.86
SIVA1-208	ENST00000556431	PRM1	P04553	51 aa		3.44	□□□□□ -1.86
SIVA1-208	ENST00000556431	LCE5A	Q5TCM9	118 aa		3.4	□□□□□ -1.86
SIVA1-208	ENST00000556431	MUC12	Q9UKN1	5478 aa		3.4	□□□□□ -1.87
SIVA1-208	ENST00000556431	LCE3E	Q5T5B0	92 aa		3.38	□□□□□ -1.87
SIVA1-208	ENST00000556431	SYNE2	Q8WXH0	6885 aa	Known RBP	3.37	□□□□□ -1.87
SIVA1-208	ENST00000556431	KRTAP9-7	A8MTY7	169 aa		3.35	□□□□□ -1.87
SIVA1-208	ENST00000556431	MT1A	P04731	61 aa		3.34	□□□□□ -1.88
SIVA1-208	ENST00000556431	LCE1A	Q5T7P2	110 aa		3.31	□□□□□ -1.88
SIVA1-208	ENST00000556431	MACF1	Q9UPN3	7388 aa	Known RBP	3.3	□□□□□ -1.88
SIVA1-208	ENST00000556431	KRTAP9-6	A0A140TA67	174 aa		3.27	□□□□□ -1.89
SIVA1-208	ENST00000556431	KRTAP6-1	Q3LI64	71 aa		3.27	□□□□□ -1.89
SIVA1-208	ENST00000556431	MUC19	Q7Z5P9	8384 aa		3.26	□□□□□ -1.89
SIVA1-208	ENST00000556431	MT3	P25713	68 aa		3.25	□□□□□ -1.89
SIVA1-208	ENST00000556431	MT4	P47944	62 aa		3.21	□□□□□ -1.9
SIVA1-208	ENST00000556431	KRTAP6-3	Q3LI67	103 aa		3.2	□□□□□ -1.9
SIVA1-208	ENST00000556431	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.2	□□□□□ -1.9
SIVA1-208	ENST00000556431	KRTAP6-2	Q3LI66	62 aa		3.12	□□□□□ -1.91
SIVA1-208	ENST00000556431	KRTAP5-9	P26371	169 aa		3.1	□□□□□ -1.91
SIVA1-208	ENST00000556431	KRTAP9-4	Q9BYQ2	154 aa		3.09	□□□□□ -1.91
SIVA1-208	ENST00000556431	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.07	□□□□□ -1.92
SIVA1-208	ENST00000556431	MDN1	Q9NU22	5596 aa		2.99	□□□□□ -1.93
SIVA1-208	ENST00000556431	LCE1D	Q5T752	114 aa		2.96	□□□□□ -1.93
SIVA1-208	ENST00000556431	KRTAP2-2	Q9BYT5	123 aa		2.96	□□□□□ -1.94
SIVA1-208	ENST00000556431	LCE1E	Q5T753	118 aa		2.94	□□□□□ -1.94
SIVA1-208	ENST00000556431	LCE1B	Q5T7P3	118 aa		2.92	□□□□□ -1.94
SIVA1-208	ENST00000556431	LCE4A	Q5TA78	99 aa		2.91	□□□□□ -1.94
SIVA1-208	ENST00000556431	KRTAP20-1	Q3LI63	56 aa		2.89	□□□□□ -1.95
SIVA1-208	ENST00000556431	KRTAP4-6	Q9BYQ5	205 aa		2.79	□□□□□ -1.96
SIVA1-208	ENST00000556431	NEB	P20929	6669 aa		2.76	□□□□□ -1.97
SIVA1-208	ENST00000556431	KRTAP20-2	Q3LI61	65 aa		2.7	□□□□□ -1.98
SIVA1-208	ENST00000556431	KRTAP4-11	Q9BYQ6	195 aa		2.6	□□□□□ -1.99
SIVA1-208	ENST00000556431	KRTAP5-4	Q6L8H1	288 aa		2.55	□□□□□ -2
SIVA1-208	ENST00000556431	GPR98	Q8WXG9	6306 aa		2.42	□□□□□ -2.02
SIVA1-208	ENST00000556431	HMCN1	Q96RW7	5635 aa		2.38	□□□□□ -2.03
SIVA1-208	ENST00000556431	MUC5AC	P98088	5654 aa		2.37	□□□□□ -2.03
SIVA1-208	ENST00000556431	LCE1F	Q5T754	118 aa		2.35	□□□□□ -2.03
SIVA1-208	ENST00000556431	KRTAP5-2	Q701N4	177 aa		2.32	□□□□□ -2.04
SIVA1-208	ENST00000556431	KRTAP5-3	Q6L8H2	238 aa		2.28	□□□□□ -2.04
SIVA1-208	ENST00000556431	KRTAP9-9	Q9BYP9	154 aa		2.27	□□□□□ -2.05
SIVA1-208	ENST00000556431	LCE1C	Q5T751	118 aa		2.26	□□□□□ -2.05
SIVA1-208	ENST00000556431	KRTAP4-4	Q9BYR3	166 aa		2.2	□□□□□ -2.06
SIVA1-208	ENST00000556431	KRTAP5-10	Q6L8G5	202 aa		2.19	□□□□□ -2.06
SIVA1-208	ENST00000556431	KRTAP4-12	Q9BQ66	201 aa		2.17	□□□□□ -2.06
SIVA1-208	ENST00000556431	KRTAP4-2	Q9BYR5	136 aa		2.17	□□□□□ -2.06
SIVA1-208	ENST00000556431	AHNAK2	Q8IVF2	5795 aa		2.09	□□□□□ -2.08
SIVA1-208	ENST00000556431	KRTAP5-8	O75690	187 aa		2.05	□□□□□ -2.08
SIVA1-208	ENST00000556431	KRTAP5-1	Q6L8H4	278 aa		2.02	□□□□□ -2.09
SIVA1-208	ENST00000556431	KRTAP21-1	Q3LI58	79 aa		1.93	□□□□□ -2.1
SIVA1-208	ENST00000556431	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.9	□□□□□ -2.11
SIVA1-208	ENST00000556431	KRTAP21-2	Q3LI59	83 aa		1.9	□□□□□ -2.11
SIVA1-208	ENST00000556431	KRTAP5-11	Q6L8G4	156 aa		1.86	□□□□□ -2.11
SIVA1-208	ENST00000556431	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	1.83	□□□□□ -2.12
SIVA1-208	ENST00000556431	AHNAK	Q09666	5890 aa	Known RBP	1.82	□□□□□ -2.12
SIVA1-208	ENST00000556431	KRTAP5-7	Q6L8G8	165 aa		1.76	□□□□□ -2.13
SIVA1-208	ENST00000556431	PHGR1	C9JFL3	82 aa		1.58	□□□□□ -2.16
SIVA1-208	ENST00000556431	MUC16	Q8WXI7	14507 aa		1.02	□□□□□ -2.25

Retrieved 78 of 20,778 RNA–protein pairs in 643 ms