RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
ABCD4-224ENST00000556119 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
ABCD4-224ENST00000556119 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
ABCD4-224ENST00000556119 MT1AP04731 61 aa3.89□□□□□ -1.79
ABCD4-224ENST00000556119 TNP1P09430 55 aa3.89□□□□□ -1.79
ABCD4-224ENST00000556119 CHKB-CPT1BH3BT56 60 aa3.88□□□□□ -1.79
ABCD4-224ENST00000556119 ETDBQ3ZM63 59 aa3.87□□□□□ -1.79
ABCD4-224ENST00000556119 SPATA8Q6RVD6 105 aa3.85□□□□□ -1.79
ABCD4-224ENST00000556119 SCGB1A1P11684 91 aa3.84□□□□□ -1.79
ABCD4-224ENST00000556119 COL5A1-AS1Q5SY13 56 aa3.83□□□□□ -1.8
ABCD4-224ENST00000556119 K7ERU9 68 aa3.78□□□□□ -1.8
ABCD4-224ENST00000556119 F8W1H4 67 aa3.76□□□□□ -1.81
ABCD4-224ENST00000556119 FAM240AA0A1B0GVK7 77 aa3.72□□□□□ -1.81
ABCD4-224ENST00000556119 LINC00643Q86TS7 51 aa3.68□□□□□ -1.82
ABCD4-224ENST00000556119 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
ABCD4-224ENST00000556119 GTF2H5Q6ZYL4 71 aa3.66□□□□□ -1.82
ABCD4-224ENST00000556119 A0A1B0GU33 70 aa3.65□□□□□ -1.83
ABCD4-224ENST00000556119 KRTAP23-1A1A580 65 aa3.64□□□□□ -1.83
ABCD4-224ENST00000556119 J3QR89 54 aa3.63□□□□□ -1.83
ABCD4-224ENST00000556119 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
ABCD4-224ENST00000556119 SERP1Q9Y6X1 66 aa3.61□□□□□ -1.83
ABCD4-224ENST00000556119 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
ABCD4-224ENST00000556119 SEC61GP60059 68 aa3.59□□□□□ -1.83
ABCD4-224ENST00000556119 MT3P25713 68 aa3.58□□□□□ -1.84
ABCD4-224ENST00000556119 A8MU10 97 aa3.57□□□□□ -1.84
ABCD4-224ENST00000556119 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
ABCD4-224ENST00000556119 SMIM20Q8N5G0 67 aa3.53□□□□□ -1.84
ABCD4-224ENST00000556119 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
ABCD4-224ENST00000556119 ANAPC13Q9BS18 74 aa3.52□□□□□ -1.85
ABCD4-224ENST00000556119 RPS28P62857 69 aaKnown RBP3.5□□□□□ -1.85
ABCD4-224ENST00000556119 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
ABCD4-224ENST00000556119 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
ABCD4-224ENST00000556119 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
ABCD4-224ENST00000556119 SPANXA2-OT1Q8N9U9 137 aa3.44□□□□□ -1.86
ABCD4-224ENST00000556119 CCDC179H3BU77 68 aa3.43□□□□□ -1.86
ABCD4-224ENST00000556119 COA5Q86WW8 74 aa3.41□□□□□ -1.86
ABCD4-224ENST00000556119 SNURFQ9Y675 71 aa3.41□□□□□ -1.86
ABCD4-224ENST00000556119 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
ABCD4-224ENST00000556119 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
ABCD4-224ENST00000556119 TMEM258P61165 79 aa3.35□□□□□ -1.87
ABCD4-224ENST00000556119 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
ABCD4-224ENST00000556119 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
ABCD4-224ENST00000556119 COX7CP15954 63 aa3.32□□□□□ -1.88
ABCD4-224ENST00000556119 V9GYY9 64 aa3.32□□□□□ -1.88
ABCD4-224ENST00000556119 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
ABCD4-224ENST00000556119 A0A1B0GU69 56 aa3.23□□□□□ -1.89
ABCD4-224ENST00000556119 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
ABCD4-224ENST00000556119 ATP5EP56381 51 aaPredicted RBP3.21□□□□□ -1.9
ABCD4-224ENST00000556119 PMAIP1Q13794 54 aa3.18□□□□□ -1.9
ABCD4-224ENST00000556119 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
ABCD4-224ENST00000556119 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
ABCD4-224ENST00000556119 H7BZZ5 65 aa3.14□□□□□ -1.91
ABCD4-224ENST00000556119 BRK1Q8WUW1 75 aa3.12□□□□□ -1.91
ABCD4-224ENST00000556119 Q1T7F1 81 aa3.07□□□□□ -1.92
ABCD4-224ENST00000556119 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
ABCD4-224ENST00000556119 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
ABCD4-224ENST00000556119 PRR15LQ9BU68 103 aa3.03□□□□□ -1.92
ABCD4-224ENST00000556119 PRAC1Q96KF2 57 aa2.97□□□□□ -1.93
ABCD4-224ENST00000556119 CDC42SE1Q9NRR8 79 aa2.9□□□□□ -1.95
ABCD4-224ENST00000556119 PSPHP1O15172 72 aa2.88□□□□□ -1.95
ABCD4-224ENST00000556119 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
ABCD4-224ENST00000556119 LINC01558Q9Y6Z2 57 aa2.82□□□□□ -1.96
ABCD4-224ENST00000556119 A6NED7 52 aa2.81□□□□□ -1.96
ABCD4-224ENST00000556119 UQCR11O14957 56 aa2.79□□□□□ -1.96
ABCD4-224ENST00000556119 K7ERS5 55 aa2.71□□□□□ -1.98
ABCD4-224ENST00000556119 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
ABCD4-224ENST00000556119 ROMO1P60602 79 aa2.66□□□□□ -1.98
ABCD4-224ENST00000556119 MIR22HGQ0VDD5 57 aa2.66□□□□□ -1.98
ABCD4-224ENST00000556119 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
ABCD4-224ENST00000556119 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
ABCD4-224ENST00000556119 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
ABCD4-224ENST00000556119 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
ABCD4-224ENST00000556119 LUZP6Q538Z0 58 aa2.41□□□□□ -2.02
ABCD4-224ENST00000556119 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
ABCD4-224ENST00000556119 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
ABCD4-224ENST00000556119 INE1O15225 51 aa2.1□□□□□ -2.07
ABCD4-224ENST00000556119 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
ABCD4-224ENST00000556119 PRM1P04553 51 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms